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ACD21_56

Alias: ACD21_10995.13628.11

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_56_1

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comp(87..1445)
DNA (1359bp) protein (453aa)
radA; DNA repair protein RadA
radA; DNA repair protein RadA
DNA repair protein radA n=6 Tax=Coxiella burnetii RepID=A9KBN2_COXBN (db=UNIREF evalue=9.0e-155 bit_score=550.0 identity=67.49 coverage=98.0132450331126)
seg (db=Seg db_id=seg from=352 to=362)
ACD21_56_2

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1508..2125
DNA (618bp) protein (206aa)
hypothetical protein
seg (db=Seg db_id=seg from=126 to=139)
guanyl_kin: guanylate kinase (db=HMMTigr db_id=TIGR03263 from=5 to=183 evalue=2.1e-92 interpro_id=IPR017665 interpro_description=Guanylate kinase, sub-group GO=Molecular Function: guanylate kinase activity (GO:0004385), Biological Process: purine nucleotide metabolic process (GO:0006163))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=187 evalue=1.1e-62)
ACD21_56_3

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2169..2504
DNA (336bp) protein (112aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Marinomonas sp. MWYL1 RepID=RPOZ_MARMS (db=UNIREF evalue=3.0e-22 bit_score=107.0 identity=80.88 coverage=59.8214285714286)
DNA-directed RNA polymerase subunit omega
seg (db=Seg db_id=seg from=75 to=98)
RPB6/omega subunit-like (db=superfamily db_id=SSF63562 from=1 to=84 evalue=3.8e-26 interpro_id=IPR006110 interpro_description=RNA polymerase Rpb6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
ACD21_56_4

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2611..4728
DNA (2118bp) protein (706aa)
GTP pyrophosphokinase n=6 Tax=Coxiella burnetii RepID=A9KGR5_COXBN (db=UNIREF evalue=0.0 bit_score=822.0 identity=55.6 coverage=99.4334277620397)
spoT; GTP pyrophosphokinase (EC:2.7.6.5 3.1.7.2)
spoT; GTP pyrophosphokinase (EC:2.7.6.5 3.1.7.2)
seg (db=Seg db_id=seg from=647 to=662)
ACD21_56_5

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4740..6830
DNA (2091bp) protein (697aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPY2_9GAMM (db=UNIREF evalue=0.0 bit_score=730.0 identity=55.4 coverage=99.1391678622669)
seg (db=Seg db_id=seg from=604 to=616)
ACD21_56_6

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6997..7668
DNA (672bp) protein (224aa)
outer membrane protein (db=KEGG evalue=8.0e-16 bit_score=87.0 identity=32.64 coverage=98.2142857142857)
Outer membrane protein n=6 Tax=Coxiella burnetii RepID=A9KGR1_COXBN (db=UNIREF evalue=9.0e-16 bit_score=87.0 identity=32.64 coverage=98.2142857142857)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
OMPA-like (db=superfamily db_id=SSF56925 from=35 to=221 evalue=6.5e-28)
ACD21_56_7

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7815..8435
DNA (621bp) protein (207aa)
Putative outer membrane protein n=1 Tax=Rickettsiella grylli RepID=A8PML3_9COXI (db=UNIREF evalue=3.0e-11 bit_score=71.6 identity=30.64 coverage=79.2270531400966)
outer membrane protein A; K03286 OmpA-OmpF porin, OOP family (db=KEGG evalue=1.0e-09 bit_score=66.2 identity=31.03 coverage=79.2270531400966)
OmpA_membrane (db=HMMPfam db_id=PF01389 from=35 to=203 evalue=3.8e-22 interpro_id=IPR000498 interpro_description=Outer membrane protein, OmpA-like, transmembrane domain GO=Cellular Component: cell outer membrane (GO:0009279), Cellular Component: integral to membrane (GO:0016021))
OMPA-like (db=superfamily db_id=SSF56925 from=33 to=204 evalue=3.5e-19)
ACD21_56_8

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8502..9521
DNA (1020bp) protein (340aa)
rfaF; ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
rfaF; ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
ADP-heptose--LPS heptosyltransferase II n=6 Tax=Coxiella burnetii RepID=A9KDI6_COXBN (db=UNIREF evalue=3.0e-91 bit_score=338.0 identity=51.18 coverage=98.8235294117647)
seg (db=Seg db_id=seg from=246 to=257)
ACD21_56_9

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9518..10474
DNA (957bp) protein (319aa)
Lipopolysaccharide heptosyltransferase I n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S0J2_9GAMM (db=UNIREF evalue=3.0e-88 bit_score=328.0 identity=55.4 coverage=89.6551724137931)
ADP-heptose:LPS heptosyl transferase
ADP-heptose:LPS heptosyl transferase
heptsyl_trn_I: lipopolysaccharide hepto (db=HMMTigr db_id=TIGR02193 from=2 to=314 evalue=2.5e-133 interpro_id=IPR011908 interpro_description=Lipopolysaccharide heptosyltransferase I GO=Biological Process: lipopolysaccharide biosynthetic process (GO:0009103), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757))
ACD21_56_10

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10491..11735
DNA (1245bp) protein (415aa)
proton/glutamate symport protein / Sodium/glutamate symport protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=165)
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=245)
ACD21_56_11

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comp(11750..12406)
DNA (657bp) protein (219aa)
udk; Uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Oceanobacillus iheyensis RepID=URK_OCEIH (db=UNIREF evalue=2.0e-42 bit_score=175.0 identity=46.15 coverage=94.0639269406393)
seg (db=Seg db_id=seg from=131 to=142)
URIDINE CYTIDINE KINASE I (db=HMMPanther db_id=PTHR10285:SF6 from=14 to=207 evalue=1.6e-54 interpro_id=IPR000764 interpro_description=Uridine kinase GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
ACD21_56_12

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12526..12672
DNA (147bp) protein (49aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=26 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE01987.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_56_13

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12641..13273
DNA (633bp) protein (211aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
Uncharacterized protein {ECO:0000313|EMBL:EKE01988.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_56_14

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comp(13563..13664)
DNA (102bp) protein (34aa)
13563..13664 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE01989.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

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