Alias: ACD21_44007.15918.10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD21_76_1
uncultured bacterium, Bacteria
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Not on your lists |
2..1594
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seg (db=Seg db_id=seg from=15 to=22)
seg (db=Seg db_id=seg from=85 to=96)
ARM repeat (db=superfamily db_id=SSF48371 from=127 to=515 evalue=1.3e-17 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
Uncharacterized protein {ECO:0000313|EMBL:EKE01114.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD21_76_2
uncultured bacterium, Bacteria
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Not on your lists |
1824..2582
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Generic methyl-transferase n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C1D3_NITHN (db=UNIREF evalue=1.0e-38 bit_score=163.0 identity=34.02 coverage=93.2806324110672)
generic methyl-transferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=80 to=214 evalue=9.1e-14)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=80 to=183 evalue=1.1e-10)
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ACD21_76_3
uncultured bacterium, Bacteria
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Not on your lists |
2564..3004
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ribonuclease H
Ribonuclease HI n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVA7_9GAMM (db=UNIREF evalue=6.0e-56 bit_score=219.0 identity=69.72 coverage=95.9183673469388)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=3 to=143 evalue=5.7e-61 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=2 to=142 evalue=1.1e-58)
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ACD21_76_4
uncultured bacterium, Bacteria
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Not on your lists |
3216..3929
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DNA polymerase III, epsilon subunit n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21J48_SACD2 (db=UNIREF evalue=1.0e-72 bit_score=276.0 identity=55.74 coverage=97.0588235294118)
DNA polymerase III subunit epsilon
dnaQ_proteo: DNA polymerase III, epsilon (db=HMMTigr db_id=TIGR01406 from=2 to=234 evalue=4.2e-127 interpro_id=IPR006309 interpro_description=DNA polymerase 3, epsilon subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
dnaq: exonuclease, DNA polymerase III, ep (db=HMMTigr db_id=TIGR00573 from=1 to=216 evalue=1.9e-77 interpro_id=IPR006054 interpro_description=DNA polymerase III, epsilon subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
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ACD21_76_5
uncultured bacterium, Bacteria
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Not on your lists |
3919..6507
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pepN; aminopeptidase N
pepN; aminopeptidase N
Aminopeptidase N n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RRQ9_ALLVD (db=UNIREF evalue=0.0 bit_score=800.0 identity=45.63 coverage=99.6523754345307)
seg (db=Seg db_id=seg from=833 to=840)
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ACD21_76_6
uncultured bacterium, Bacteria
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Not on your lists |
7198..8337
|
putative sensory histidine-kinase / response regulator (EC:2.7.13.3)
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=12 to=375 evalue=2.3e-48)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=12 to=375 evalue=2.3e-48)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=227 to=377 evalue=4.9e-32 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
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ACD21_76_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(8380..8514)
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8380..8514 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01106.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD21_76_8
uncultured bacterium, Bacteria
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Not on your lists |
8630..9346
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RNA methyltransferase
RNA methyltransferase TrmH, group 1 n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGT9_9GAMM (db=UNIREF evalue=2.0e-53 bit_score=212.0 identity=48.98 coverage=99.163179916318)
seg (db=Seg db_id=seg from=180 to=191)
seg (db=Seg db_id=seg from=116 to=129)
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ACD21_76_9
uncultured bacterium, Bacteria
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Not on your lists |
9399..9761
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9399..9761 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01108.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD21_76_10
uncultured bacterium, Bacteria
|
Not on your lists |
9831..10055
|
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE01109.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD21_76_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(10186..11481)
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purA; adenylosuccinate synthetase (EC:6.3.4.4)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Azotobacter vinelandii DJ RepID=PURA_AZOVD (db=UNIREF evalue=6.0e-170 bit_score=600.0 identity=66.05 coverage=99.3055555555556)
seg (db=Seg db_id=seg from=245 to=254)
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ACD21_76_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(11497..11679)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
seg (db=Seg db_id=seg from=1 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=59)
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ACD21_76_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(12715..13929)
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hflK; HflK protein (EC:3.4.-.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
seg (db=Seg db_id=seg from=363 to=372)
seg (db=Seg db_id=seg from=66 to=77)
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ACD21_76_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(13998..15269)
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small GTP-binding protein
small GTP-binding protein
GTP-binding protein HflX n=2 Tax=Aeromonas RepID=A0KGS2_AERHH (db=UNIREF evalue=4.0e-135 bit_score=484.0 identity=61.96 coverage=98.1132075471698)
seg (db=Seg db_id=seg from=179 to=196)
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ACD21_76_15
uncultured bacterium, Bacteria
|
Not on your lists |
comp(15289..15588)
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hfq; RNA-binding protein Hfq
seg (db=Seg db_id=seg from=75 to=97)
Hfq: RNA chaperone Hfq (db=HMMTigr db_id=TIGR02383 from=5 to=64 evalue=6.6e-38 interpro_id=IPR005001 interpro_description=Host factor Hfq GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:2.30.30.100 from=1 to=76 evalue=4.8e-25)
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