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ACD21_82

Alias: ACD21_25872.15352.12

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_82_1

Not on your lists

3..149
DNA (147bp) protein (49aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE01430.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_82_2

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comp(108..2060)
DNA (1953bp) protein (651aa)
ferrous iron transport protein B
ferrous iron transport protein B
Ferrous iron transport protein B n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJD9_METPE (db=UNIREF evalue=5.0e-158 bit_score=561.0 identity=46.55 coverage=97.2350230414747)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=308)
ACD21_82_3

Not on your lists

comp(2057..2302)
DNA (246bp) protein (82aa)
FeoA family protein
Protein, probably involved in Fe2+ transport n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RD11_THETN (db=UNIREF evalue=1.0e-11 bit_score=71.6 identity=41.77 coverage=95.1219512195122)
no description (db=HMMSmart db_id=SM00899 from=8 to=80 evalue=8.9e-17 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
FeoA (db=HMMPfam db_id=PF04023 from=9 to=79 evalue=1.5e-15 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
ACD21_82_4

Not on your lists

comp(2427..2720)
DNA (294bp) protein (98aa)
yfiA; ribosomal subunit interface protein
Ribosomal subunit interface protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PBZ6_CELJU (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=55.32 coverage=94.8979591836735)
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=4 to=95 evalue=4.3e-28 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=3 to=96 evalue=4.2e-27 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
ACD21_82_5

Not on your lists

comp(2793..3518)
DNA (726bp) protein (242aa)
LPS ABC transporter ATP-binding protein
LPS ABC transporter ATP-binding protein
LPS ABC transporter ATP-binding protein n=6 Tax=Coxiella burnetii RepID=B6J8V6_COXB1 (db=UNIREF evalue=2.0e-86 bit_score=322.0 identity=70.12 coverage=98.7603305785124)
seg (db=Seg db_id=seg from=103 to=115)
ACD21_82_6

Not on your lists

comp(3531..3929)
DNA (399bp) protein (133aa)
OstA family protein n=2 Tax=Legionella longbeachae RepID=D3HJ31_LEGLN (db=UNIREF evalue=2.0e-09 bit_score=64.7 identity=34.31 coverage=96.2406015037594)
OstA family protein; K09774 lipopolysaccharide export system protein LptA (db=KEGG evalue=2.0e-09 bit_score=64.7 identity=34.31 coverage=96.2406015037594)
OstA (db=HMMPfam db_id=PF03968 from=10 to=130 evalue=1.4e-19 interpro_id=IPR005653 interpro_description=Organic solvent tolerance-like, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKE01435.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_82_7

Not on your lists

comp(3980..5323)
DNA (1344bp) protein (448aa)
Signal recognition particle subunit Ffh SRP54
Signal recognition particle subunit Ffh SRP54
Signal recognition particle protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N9Z7_9GAMM (db=UNIREF evalue=5.0e-150 bit_score=534.0 identity=62.58 coverage=99.3303571428571)
seg (db=Seg db_id=seg from=169 to=180)
ACD21_82_8

Not on your lists

5431..5979
DNA (549bp) protein (183aa)
fimbrial pilin related signal peptide protein
seg (db=Seg db_id=seg from=21 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Pili subunits (db=superfamily db_id=SSF54523 from=19 to=153 evalue=2.9e-20)
ACD21_82_9

Not on your lists

6037..6699
DNA (663bp) protein (221aa)
Adenylate kinase n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=KAD_CHLP8 (db=UNIREF evalue=4.0e-77 bit_score=290.0 identity=61.57 coverage=97.2850678733032)
adk; adenylate kinase (EC:2.7.4.10)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=81 to=92 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
adk: adenylate kinases (db=HMMTigr db_id=TIGR01351 from=2 to=217 evalue=2.5e-102 interpro_id=IPR006259 interpro_description=Adenylate kinase, subfamily GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: phosphotransferase activity, phosphate group as acceptor (GO:0016776), Molecular Function: nucleotide kinase activity (GO:0019201))
ACD21_82_10

Not on your lists

6873..8039
DNA (1167bp) protein (389aa)
rosB; transporter, monovalent cation:proton antiporter-2 (CPA2) family
rosB; transporter, monovalent cation:proton antiporter-2 (CPA2) family
Sodium/hydrogen antiporter n=5 Tax=Legionella pneumophila RepID=D5TDA3_LEGPN (db=UNIREF evalue=3.0e-81 bit_score=305.0 identity=50.77 coverage=98.7146529562982)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=170)
ACD21_82_11

Not on your lists

8181..9032
DNA (852bp) protein (284aa)
beta-lactamase induction protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=260 to=282)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=86)
ACD21_82_12

Not on your lists

9072..10490
DNA (1419bp) protein (473aa)
lpdA; dihydrolipoyl dehydrogenase, E3 component of pyruvate dehydrogenases complex (EC:1.8.1.4)
lpdA; dihydrolipoyl dehydrogenase, E3 component of pyruvate dehydrogenases complex (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Methylobacterium sp. 4-46 RepID=B0U861_METS4 (db=UNIREF evalue=7.0e-171 bit_score=603.0 identity=65.47 coverage=98.9429175475687)
seg (db=Seg db_id=seg from=124 to=136)
ACD21_82_13

Not on your lists

10591..10830
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVF7_DESOH (db=UNIREF evalue=3.0e-17 bit_score=90.5 identity=55.13 coverage=95.0)
hypothetical protein
ORF6N (db=HMMPfam db_id=PF10543 from=16 to=72 evalue=4.3e-19 interpro_id=IPR018873 interpro_description=KilA-N, DNA-binding domain)
Uncharacterized protein {ECO:0000313|EMBL:EKE01442.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_82_14

Not on your lists

10797..11138
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABS0_9BACT (db=UNIREF evalue=1.0e-19 bit_score=98.6 identity=48.6 coverage=92.9824561403509)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=52 to=80 evalue=NA)
seg (db=Seg db_id=seg from=61 to=73)
ACD21_82_15

Not on your lists

11323..12171
DNA (849bp) protein (283aa)
ABC transporter
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=211 evalue=1.0e-52)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF4 from=2 to=211 evalue=1.0e-52)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=217 evalue=4.2e-46)
ACD21_82_16

Not on your lists

12161..12895
DNA (735bp) protein (245aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=233)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
ACD21_82_17

Not on your lists

12895..13269
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QK51_SPILD (db=UNIREF evalue=6.0e-26 bit_score=119.0 identity=43.97 coverage=92.0)
GntR family transcriptional regulator
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=114 evalue=1.6e-15)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=2 to=72 evalue=1.2e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD21_82_18

Not on your lists

13437..14126
DNA (690bp) protein (230aa)
hypothetical protein (db=KEGG evalue=3.0e-11 bit_score=72.0 identity=26.98 coverage=72.1739130434783)
Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSJ1_9BACT (db=UNIREF evalue=2.0e-09 bit_score=66.2 identity=26.67 coverage=87.8260869565217)
DUF2807 (db=HMMPfam db_id=PF10988 from=26 to=210 evalue=3.0e-26 interpro_id=IPR021255 interpro_description=Protein of unknown function DUF2807)
Uncharacterized protein {ECO:0000313|EMBL:EKE01428.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_82_19

Not on your lists

14167..15093
DNA (927bp) protein (309aa)
gtrB; bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage
gtrB; bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage
Bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LQN4_RALME (db=UNIREF evalue=4.0e-103 bit_score=377.0 identity=62.95 coverage=97.7346278317152)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
Displaying 19 items

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