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ACD21_103

Alias: ACD21_107216.3990.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_103_1

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1..726
DNA (726bp) protein (242aa)
dolichyl-phosphate mannose synthase-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=4 to=198 evalue=1.8e-48)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=196 evalue=7.5e-41)
ACD21_103_2

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comp(706..1536)
DNA (831bp) protein (277aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
seg (db=Seg db_id=seg from=154 to=167)
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=1 to=273 evalue=2.2e-61 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=197 evalue=2.2e-54 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD21_103_3

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comp(1533..2045)
DNA (513bp) protein (171aa)
Peptide deformylase n=1 Tax=Bartonella henselae RepID=DEF_BARHE (db=UNIREF evalue=5.0e-26 bit_score=120.0 identity=41.83 coverage=88.3040935672515)
peptide deformylase
Peptide deformylase (db=superfamily db_id=SSF56420 from=20 to=170 evalue=6.4e-48 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Pep_deformylase (db=HMMPfam db_id=PF01327 from=23 to=169 evalue=3.8e-46 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD21_103_4

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comp(2011..3558)
DNA (1548bp) protein (516aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] (db=KEGG evalue=6.0e-24 bit_score=115.0 identity=26.04 coverage=66.0852713178295)
seg (db=Seg db_id=seg from=161 to=170)
Uncharacterized protein {ECO:0000313|EMBL:EKE01993.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
seg 52..65 alias=ACD41_4082.8961.16G0005,ACD41_4082.8961.16_5,ACD41_C00110G00005 id=53638 tax=ACD41 species=OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc=OD1
ACD21_103_5

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comp(3558..4022)
DNA (465bp) protein (155aa)
hypothetical protein
LigB (db=HMMPfam db_id=PF02900 from=4 to=134 evalue=1.2e-13 interpro_id=IPR004183 interpro_description=Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Molecular Function: oxidoreductase activity (GO:0016491))
LigB subunit of an aromatic-ring-opening dioxygenase LigAB (db=superfamily db_id=SSF53213 from=2 to=152 evalue=2.0e-11 interpro_id=IPR004183 interpro_description=Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Molecular Function: oxidoreductase activity (GO:0016491))
Uncharacterized protein {ECO:0000313|EMBL:EKE01994.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

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