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ACD21_107

Alias: ACD21_19505.7945.11

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_107_1

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2..1024
DNA (1023bp) protein (341aa)
poxA; lysyl-tRNA synthetase (EC:6.1.1.6)
poxA; lysyl-tRNA synthetase (EC:6.1.1.6)
Predicted lysyl-tRNA synthetase n=3 Tax=Aliivibrio RepID=Q5E2B8_VIBF1 (db=UNIREF evalue=2.0e-84 bit_score=316.0 identity=54.34 coverage=87.3900293255132)
seg (db=Seg db_id=seg from=313 to=329)
ACD21_107_2

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comp(1021..2109)
DNA (1089bp) protein (363aa)
GTP-binding protein YchF n=2 Tax=Marinobacter RepID=A1U375_MARAV (db=UNIREF evalue=7.0e-138 bit_score=493.0 identity=65.29 coverage=99.4490358126722)
GTP-binding and nucleic acid-binding protein YchF
GTP-binding and nucleic acid-binding protein YchF
Predicted GTP-dependent nucleic acid-binding protein, EngD type (db=HMMPIR db_id=PIRSF006641 from=1 to=362 evalue=4.9e-226 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
ACD21_107_3

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2241..2510
DNA (270bp) protein (90aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
seg (db=Seg db_id=seg from=69 to=85)
Uncharacterized protein {ECO:0000313|EMBL:EKE01653.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_107_4

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2647..3387
DNA (741bp) protein (247aa)
N-acetylmuramoyl-L-alanine amidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=19 to=33)
N-acetylmuramoyl-L-alanine amidase-like (db=superfamily db_id=SSF55846 from=64 to=245 evalue=1.1e-29 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
ACD21_107_5

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comp(3422..4024)
DNA (603bp) protein (201aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Methylobacillus flagellatus KT RepID=PTH_METFK (db=UNIREF evalue=4.0e-51 bit_score=204.0 identity=51.6 coverage=92.5373134328358)
PEPT_TRNA_HYDROL_1 (db=PatternScan db_id=PS01195 from=20 to=33 evalue=0.0 interpro_id=IPR018171 interpro_description=Peptidyl-tRNA hydrolase, conserved site GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
pth: peptidyl-tRNA hydrolase (db=HMMTigr db_id=TIGR00447 from=7 to=193 evalue=1.5e-83 interpro_id=IPR001328 interpro_description=Peptidyl-tRNA hydrolase GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
ACD21_107_6

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comp(4037..4765)
DNA (729bp) protein (243aa)
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 n=2 Tax=Nitrosococcus oceani RepID=RL25_NITOC (db=UNIREF evalue=9.0e-55 bit_score=216.0 identity=51.5 coverage=80.6584362139918)
seg (db=Seg db_id=seg from=210 to=242)
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=198 evalue=3.2e-55 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ACD21_107_7

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comp(4972..7014)
DNA (2043bp) protein (681aa)
seg (db=Seg db_id=seg from=156 to=171)
seg (db=Seg db_id=seg from=36 to=48)
coiled-coil (db=Coil db_id=coil from=201 to=234 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE01657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_107_8

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comp(7345..7983)
DNA (639bp) protein (213aa)
Mg chelatase subunit ChlI
Mg chelatase-related protein n=2 Tax=Nitrosococcus oceani RepID=Q3J9N1_NITOC (db=UNIREF evalue=3.0e-68 bit_score=261.0 identity=62.09 coverage=98.1220657276995)
seg (db=Seg db_id=seg from=123 to=138)
Mg_chelatase (db=HMMPfam db_id=PF01078 from=1 to=107 evalue=2.3e-51 interpro_id=IPR000523 interpro_description=Magnesium chelatase, ChlI subunit GO=Biological Process: photosynthesis (GO:0015979), Biological Process: chlorophyll biosynthetic process (GO:0015995), Molecular Function: magnesium chelatase activity (GO:0016851))
Displaying 8 items

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