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ACD21_11_31

Organism: ACD21

near complete RP 51 / 55 MC: 17 BSCG 48 / 51 MC: 7 ASCG 0 / 38
Location: comp(31652..32128)

Top 3 Functional Annotations

Value Algorithm Source
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 158.0
  • Bit_score: 202
  • Evalue 7.50e-50
GREAB_1 (db=PatternScan db_id=PS00829 from=17 to=48 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
GREAB_2 (db=PatternScan db_id=PS00830 from=121 to=137 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 477
ATGCAAAAAGTTCCAATGACCGTTAAAGGTGCAAATACTTTGCGCCAAGAACTAGAAAAATTAAAAACCATTGATCGTCCACACATCGCCAAAGCAATTGGCGAAGCTCGAGCGCATGGCGATCTACGTGAAAATGCTGAATATCATTCAGCTAAAGAAGCTCAAGGGTTTATCGAAGCTCGAATTCGCGACATTGAAGGCAAGCTTTCAAATGCCAATATTATTGACGTTTCTCGCCTACCCCAAAATGGGATAGTAGTGTTTGGCACTACAGTTCATGTTTCAAATATAGACACTGATGCCAATTCTACTTACACATTAGTCGGTGACGATGAGGCTGATTTTAAACTAGGAAAGATTTCTATTAATTCGCCAATCGCCCGCTCCCTTGTTGGCAAAAAAATTGGTGATTTGGCTCAAGCCACCACTCCAACAGGGCCAATGCAGCTGGAGATTATAAAAATTGAATATATTTAG
PROTEIN sequence
Length: 159
MQKVPMTVKGANTLRQELEKLKTIDRPHIAKAIGEARAHGDLRENAEYHSAKEAQGFIEARIRDIEGKLSNANIIDVSRLPQNGIVVFGTTVHVSNIDTDANSTYTLVGDDEADFKLGKISINSPIARSLVGKKIGDLAQATTPTGPMQLEIIKIEYI*