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ACD22_52

Alias: ACD22_5016.10270.20

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_52_1

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1..447
DNA (447bp) protein (149aa)
Probable tRNA pseudouridine synthase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIL5_9FLAO (db=UNIREF evalue=2.0e-19 bit_score=97.8 identity=37.84 coverage=88.5906040268456)
tRNA pseudouridine synthase B
TRNA-PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR13767 from=20 to=141 evalue=3.1e-27)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=3 to=140 evalue=1.3e-22 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD22_52_2

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comp(449..1780)
DNA (1332bp) protein (444aa)
seg (db=Seg db_id=seg from=172 to=184)
seg (db=Seg db_id=seg from=127 to=141)
seg (db=Seg db_id=seg from=106 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=292 to=314)
ACD22_52_3

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1807..3345
DNA (1539bp) protein (513aa)
hypothetical protein
Genome sequencing data, contig C316 n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YI58_MICAE (db=UNIREF evalue=2.0e-21 bit_score=108.0 identity=25.98 coverage=84.2105263157895)
seg (db=Seg db_id=seg from=315 to=332)
seg (db=Seg db_id=seg from=193 to=211)
ACD22_52_4

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3332..5713
DNA (2382bp) protein (794aa)
seg (db=Seg db_id=seg from=150 to=159)
seg (db=Seg db_id=seg from=114 to=133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=396 to=418)
transmembrane_regions (db=TMHMM db_id=tmhmm from=367 to=389)
ACD22_52_5

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comp(5693..6166)
DNA (474bp) protein (158aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=18 to=34)
Pili subunits (db=superfamily db_id=SSF54523 from=16 to=151 evalue=2.6e-14)
ACD22_52_6

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comp(6217..6600)
DNA (384bp) protein (128aa)
hypothetical protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=105 evalue=5.0e-17 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=32 to=102 evalue=2.9e-13 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=17 to=101 evalue=9.7e-09 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD22_52_7

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comp(6627..6911)
DNA (285bp) protein (95aa)
Germane (db=HMMPfam db_id=PF10646 from=2 to=89 evalue=3.7e-10 interpro_id=IPR019606 interpro_description=Lipoprotein LpqB, GerMN domain)
Uncharacterized protein {ECO:0000313|EMBL:EKD99729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_52_8

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comp(7292..7690)
DNA (399bp) protein (133aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMH6_9FIRM (db=UNIREF evalue=3.0e-24 bit_score=114.0 identity=48.98 coverage=72.9323308270677)
DUF45 (db=HMMPfam db_id=PF01863 from=26 to=124 evalue=4.6e-38 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
Uncharacterized protein {ECO:0000313|EMBL:EKD99717.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_52_9

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comp(7642..7914)
DNA (273bp) protein (91aa)
7642..7914 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99718.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_52_10

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comp(7911..8243)
DNA (333bp) protein (111aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD99719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD22_C00052G00010,ACD22_5016.10270.20G0010,ACD22_5016.10270.20_10 id=23058 tax=ACD22 species=Anabaena variabilis genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria organism_group=WWE3 organism_desc=WWE3
ACD22_52_11

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comp(8256..9128)
DNA (873bp) protein (291aa)
hypothetical protein
seg (db=Seg db_id=seg from=66 to=78)
Radical_SAM (db=HMMPfam db_id=PF04055 from=26 to=188 evalue=4.3e-09 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
no description (db=HMMSmart db_id=SM00729 from=22 to=250 evalue=0.0023 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
ACD22_52_12

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comp(9143..9478)
DNA (336bp) protein (112aa)
hypothetical protein
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=93 evalue=2.9e-18)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=11 to=87 evalue=4.8e-12 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
Uncharacterized protein {ECO:0000313|EMBL:EKD99721.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_52_13

Not on your lists

comp(9837..10310)
DNA (474bp) protein (158aa)
ATP-dependent Clp protease proteolytic subunit
ATP-dependent Clp protease proteolytic subunit n=2 Tax=unclassified Gammaproteobacteria RepID=B8KGN5_9GAMM (db=UNIREF evalue=1.0e-43 bit_score=178.0 identity=54.84 coverage=97.4683544303797)
seg (db=Seg db_id=seg from=57 to=70)
PROTEASE FAMILY S14 CLPP PROTEASE (db=HMMPanther db_id=PTHR10381 from=19 to=153 evalue=7.4e-66 interpro_id=IPR001907 interpro_description=Peptidase S14, ClpP GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
Displaying 13 items

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