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ACD23_44

Alias: ACD23_5895.14752.29

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_44_1

Not on your lists

comp(1036..1743)
DNA (708bp) protein (236aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD97271.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMT6_METPP
ACD23_44_2

Not on your lists

1986..2279
DNA (294bp) protein (98aa)
seg (db=Seg db_id=seg from=2 to=18)
seg (db=Seg db_id=seg from=27 to=39)
Uncharacterized protein {ECO:0000313|EMBL:EKD97272.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_3

Not on your lists

comp(2372..2692)
DNA (321bp) protein (107aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax sp. JS42 RepID=A1W739_ACISJ (db=UNIREF evalue=8.0e-39 bit_score=162.0 identity=79.81 coverage=95.3271028037383)
XRE family transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=24 to=92 evalue=4.4e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=34 to=82 evalue=1.3e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD23_44_4

Not on your lists

comp(2689..3075)
DNA (387bp) protein (129aa)
hypothetical protein
Gp49 (db=HMMPfam db_id=PF05973 from=17 to=110 evalue=4.8e-19 interpro_id=IPR009241 interpro_description=Protein of unknown function DUF891)
Uncharacterized protein {ECO:0000313|EMBL:EKD97274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AL6_POLSJ
ACD23_44_5

Not on your lists

comp(3072..3530)
DNA (459bp) protein (153aa)
3072..3530 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD97275.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_6

Not on your lists

comp(3815..4282)
DNA (468bp) protein (156aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=137 to=144)
ACD23_44_7

Not on your lists

comp(4286..4504)
DNA (219bp) protein (73aa)
4286..4504 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD97277.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_8

Not on your lists

comp(4780..7167)
DNA (2388bp) protein (796aa)
XRE family transcriptional regulator
XRE family transcriptional regulator
Transcriptional regulator, XRE family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Q29_RHOFD (db=UNIREF evalue=0.0 bit_score=717.0 identity=49.49 coverage=97.1105527638191)
seg (db=Seg db_id=seg from=680 to=695)
ACD23_44_9

Not on your lists

7216..7719
DNA (504bp) protein (168aa)
7216..7719 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD97279.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_10

Not on your lists

comp(8125..8475)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YF67_9BURK (db=UNIREF evalue=3.0e-18 bit_score=94.0 identity=50.0 coverage=76.0683760683761)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD97280.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_11

Not on your lists

comp(8586..9032)
DNA (447bp) protein (149aa)
membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21PY5_RHOFD (db=UNIREF evalue=4.0e-36 bit_score=153.0 identity=66.19 coverage=90.6040268456376)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
ACD23_44_12

Not on your lists

comp(9052..9948)
DNA (897bp) protein (299aa)
endonuclease rbh
endonuclease rbh
Putative endonuclease n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K035_PSEFS (db=UNIREF evalue=1.0e-102 bit_score=376.0 identity=74.68 coverage=78.9297658862876)
seg (db=Seg db_id=seg from=8 to=25)
ACD23_44_13

Not on your lists

comp(10054..10515)
DNA (462bp) protein (154aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
Uncharacterized protein {ECO:0000313|EMBL:EKD97283.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_14

Not on your lists

comp(10682..11422)
DNA (741bp) protein (247aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD97284.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Q04_RHOFD
ACD23_44_15

Not on your lists

comp(11452..11799)
DNA (348bp) protein (116aa)
seg (db=Seg db_id=seg from=28 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD97285.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_16

Not on your lists

comp(11805..12344)
DNA (540bp) protein (180aa)
11805..12344 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD97286.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_17

Not on your lists

comp(12598..13758)
DNA (1161bp) protein (387aa)
seg (db=Seg db_id=seg from=141 to=152)
Uncharacterized protein {ECO:0000313|EMBL:EKD97287.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_44_18

Not on your lists

comp(14069..14797)
DNA (729bp) protein (243aa)
hypothetical protein
seg (db=Seg db_id=seg from=193 to=211)
Uncharacterized protein {ECO:0000313|EMBL:EKD97288.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121A6_POLSJ
Displaying 18 items

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