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ACD23_232

Alias: ACD23_109766.7527.13

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_232_1
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1..726
DNA (726bp) protein (242aa)
site-specific DNA-methyltransferase
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
Modification methylase BsuBI n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FLX7_XANCI
ACD23_232_2
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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723..1679
DNA (957bp) protein (319aa)
Type II restriction enzyme BsuBI (EC:3.1.21.4)
Type II restriction enzyme BsuBI (EC:3.1.21.4)
BsuBI/PstI restriction endonuclease, C-terminal n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y582_NITMU (db=UNIREF evalue=3.0e-151 bit_score=538.0 identity=84.24 coverage=97.1786833855799)
seg (db=Seg db_id=seg from=31 to=40)
ACD23_232_3
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2048..2767
DNA (720bp) protein (240aa)
2048..2767 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
ACD23_232_4
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2835..3611
DNA (777bp) protein (259aa)
HIRAN (db=HMMPfam db_id=PF08797 from=42 to=82 evalue=0.0001 interpro_id=IPR014905 interpro_description=HIP116, Rad5p N-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818))
Uncharacterized protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
ACD23_232_5

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comp(4208..4474)
DNA (267bp) protein (89aa)
Integrase catalytic region
Transposase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D730_LARHH (db=UNIREF evalue=3.0e-35 bit_score=150.0 identity=77.78 coverage=89.8876404494382)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=83 evalue=2.1e-16 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=2 to=37 evalue=2.5e-07 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD23_232_6
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4794..5174)
DNA (381bp) protein (127aa)
integrase catalytic subunit
ISxac2 transposase n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VK81_PSEU5 (db=UNIREF evalue=3.0e-36 bit_score=154.0 identity=76.04 coverage=74.8031496062992)
ISxac2 transposase {ECO:0000313|EMBL:EIZ02312.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
ACD23_232_7

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comp(5195..5461)
DNA (267bp) protein (89aa)
ISSod2, transposase OrfA n=2 Tax=Pseudomonas RepID=A4VK82_PSEU5 (db=UNIREF evalue=6.0e-41 bit_score=169.0 identity=89.77 coverage=97.752808988764)
transposase family protein
coiled-coil (db=Coil db_id=coil from=49 to=77 evalue=NA)
Transposase_8 (db=HMMPfam db_id=PF01527 from=2 to=72 evalue=4.9e-18 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
ACD23_232_8

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comp(5925..6155)
DNA (231bp) protein (77aa)
5925..6155 - (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99221.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_232_9

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comp(6162..6413)
DNA (252bp) protein (84aa)
6162..6413 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99222.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_232_10

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6612..7535
DNA (924bp) protein (308aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Gallionella capsiferriformans ES-2 RepID=C5V7D5_9PROT (db=UNIREF evalue=9.0e-80 bit_score=300.0 identity=50.17 coverage=94.8051948051948)
Exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=38 to=230 evalue=1.6e-35 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
Displaying 10 items

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