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ACD23_453

Alias: ACD23_33983.4311.12

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_453_1

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comp(1..150)
DNA (150bp) protein (50aa)
hflk protein
HflK protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C4_ACIDE (db=UNIREF evalue=4.0e-14 bit_score=80.1 identity=89.74 coverage=76.0)
seg (db=Seg db_id=seg from=40 to=50)
HflK protein {ECO:0000313|EMBL:EKD98046.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_453_2

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comp(204..872)
DNA (669bp) protein (223aa)
GTP-binding protein HflX
seg (db=Seg db_id=seg from=18 to=32)
coiled-coil (db=Coil db_id=coil from=6 to=27 evalue=NA)
GTP-BINDING PROTEIN HFLX (db=HMMPanther db_id=PTHR10229 from=1 to=205 evalue=5.2e-71)
ACD23_453_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(974..1474)
DNA (501bp) protein (167aa)
GTP-binding protein, HSR1-like protein
seg (db=Seg db_id=seg from=144 to=157)
GTP-BINDING PROTEIN HFLX (db=HMMPanther db_id=PTHR10229 from=86 to=143 evalue=7.9e-17)
GTPase HflX n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2E1_9BURK
ACD23_453_4

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comp(1481..1738)
DNA (258bp) protein (86aa)
Protein hfq n=5 Tax=Comamonadaceae RepID=HFQ_ACIET (db=UNIREF evalue=9.0e-37 bit_score=155.0 identity=91.46 coverage=94.1860465116279)
RNA chaperone hfq
Hfq: RNA chaperone Hfq (db=HMMTigr db_id=TIGR02383 from=6 to=65 evalue=5.7e-35 interpro_id=IPR005001 interpro_description=Host factor Hfq GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:2.30.30.100 from=2 to=77 evalue=9.7e-25)
ACD23_453_5

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comp(1846..3189)
DNA (1344bp) protein (448aa)
GTP-binding protein engA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C1_ACIDE (db=UNIREF evalue=0.0 bit_score=890.0 identity=96.63 coverage=99.1071428571429)
GTP-binding protein Der
GTP-binding protein Der
GTPase_EngA: ribosome-associated GTPase E (db=HMMTigr db_id=TIGR03594 from=3 to=435 evalue=1.6e-260 interpro_id=IPR016484 interpro_description=GTP-binding, EngA GO=Molecular Function: GTP binding (GO:0005525))
ACD23_453_6

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4173..4349
DNA (177bp) protein (59aa)
4173..4349 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD98043.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

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