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ACD23_455

Alias: ACD23_63368.6224.7

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_455_1

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comp(2..226)
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=2 to=16)
Uncharacterized protein {ECO:0000313|EMBL:EKD97158.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD23_455_2

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379..807
DNA (429bp) protein (143aa)
vsr; very short patch repair endonuclease
Very short patch repair endonuclease (db=HMMPIR db_id=PIRSF018267 from=7 to=140 evalue=2.0e-64 interpro_id=IPR004603 interpro_description=DNA mismatch endonuclease vsr GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: mismatch repair (GO:0006298))
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=5 to=142 evalue=1.7e-51 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
vsr: DNA mismatch endonuclease Vsr (db=HMMTigr db_id=TIGR00632 from=7 to=124 evalue=2.7e-47 interpro_id=IPR004603 interpro_description=DNA mismatch endonuclease vsr GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: mismatch repair (GO:0006298))
ACD23_455_3

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1500..2840
DNA (1341bp) protein (447aa)
seg (db=Seg db_id=seg from=415 to=427)
seg (db=Seg db_id=seg from=158 to=171)
Uncharacterized protein {ECO:0000313|EMBL:EKD97153.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_455_4

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3172..3738
DNA (567bp) protein (189aa)
Integrase family protein n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AEX5_BURM1 (db=UNIREF evalue=3.0e-63 bit_score=244.0 identity=62.23 coverage=98.9417989417989)
integrase family protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=3 to=188 evalue=2.0e-40 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=5 to=186 evalue=3.3e-35 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD23_455_5

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3940..4776
DNA (837bp) protein (279aa)
Restriction endonuclease {ECO:0000313|EMBL:EKD97155.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Uncharacterized protein n=2 Tax=Octadecabacter arcticus 238 RepID=M9RIJ5_9RHOB
ACD23_455_6

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comp(4773..5828)
DNA (1056bp) protein (352aa)
Cytosine-specific methyltransferase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K427_9RHOB (db=UNIREF evalue=7.0e-115 bit_score=417.0 identity=57.68 coverage=96.3068181818182)
putative C-5 cytosine-specific DNA methylase
C5_MTASE_1 (db=PatternScan db_id=PS00094 from=69 to=81 evalue=0.0 interpro_id=IPR018117 interpro_description=DNA methylase, C-5 cytosine-specific, active site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=3 to=351 evalue=7.0e-72)
ACD23_455_7

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comp(5913..6257)
DNA (345bp) protein (115aa)
phage integrase family protein
Phage integrase family protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4T0L4_POLSQ (db=UNIREF evalue=8.0e-17 bit_score=89.4 identity=46.15 coverage=86.9565217391304)
seg (db=Seg db_id=seg from=103 to=114)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=37 to=114 evalue=5.0e-06 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Displaying 7 items

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