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ACD23_652

Alias: ACD23p_18296.12478.21

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD23_652_1

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234..668
DNA (435bp) protein (145aa)
Integrase family protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=F0QDE8_ACIAP (db=UNIREF evalue=2.0e-49 bit_score=197.0 identity=68.75 coverage=98.6206896551724)
integrase family protein
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=1 to=136 evalue=5.9e-21 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=19 to=137 evalue=5.5e-20 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
ACD23_652_2

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comp(1070..2008)
DNA (939bp) protein (313aa)
Putative transcriptional regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G749_HERAR (db=UNIREF evalue=7.0e-112 bit_score=407.0 identity=65.67 coverage=95.5271565495208)
hypothetical protein
hypothetical protein
ACD23_652_3

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2113..2451
DNA (339bp) protein (113aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
Uncharacterized protein {ECO:0000313|EMBL:EKD96587.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_4

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2489..3385
DNA (897bp) protein (299aa)
cell division protein
cell division protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=19 to=287 evalue=1.1e-37)
ACD23_652_5

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3382..3867
DNA (486bp) protein (162aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD96589.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z6P5_9RHOO
ACD23_652_6

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3864..4364
DNA (501bp) protein (167aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=16)
The spindle assembly checkpoint protein mad2 (db=superfamily db_id=SSF56019 from=5 to=164 evalue=1.7e-19 interpro_id=IPR003511 interpro_description=DNA-binding HORMA GO=Biological Process: mitosis (GO:0007067))
Uncharacterized protein {ECO:0000313|EMBL:EKD96590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_7
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4361..5467
DNA (1107bp) protein (369aa)
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain-containing protein region
seg (db=Seg db_id=seg from=269 to=286)
ACD23_652_8

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5409..6866
DNA (1458bp) protein (486aa)
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD96583.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_9

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comp(7055..9058)
DNA (2004bp) protein (668aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=B7T9W7_9BACT (db=UNIREF evalue=4.0e-167 bit_score=592.0 identity=48.11 coverage=97.0059880239521)
hypothetical protein
hypothetical protein
ACD23_652_10

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9358..10308
DNA (951bp) protein (317aa)
transposase IS4
transposase IS4
no description (db=Gene3D db_id=G3DSA:3.90.350.10 from=7 to=282 evalue=3.0e-53 interpro_id=IPR014736 interpro_description=Transposase, Tn5-like, core)
ACD23_652_11

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comp(10571..10711)
DNA (141bp) protein (47aa)
Transposase IS66 n=2 Tax=Alicycliphilus denitrificans RepID=F4G6L2_ALIDK (db=UNIREF evalue=2.0e-18 bit_score=94.7 identity=91.3 coverage=95.7446808510638)
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:EKD96582.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_12

Not on your lists

10998..11441
DNA (444bp) protein (148aa)
10998..11441 + ( gc_cont=0.619)
Uncharacterized protein {ECO:0000313|EMBL:EKD96580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_13

Not on your lists

11587..12081
DNA (495bp) protein (165aa)
seg (db=Seg db_id=seg from=90 to=115)
seg (db=Seg db_id=seg from=30 to=42)
seg (db=Seg db_id=seg from=6 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKD96578.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD23_652_14

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comp(12225..12518)
DNA (294bp) protein (98aa)
IS66 Orf2 like
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
(db=HMMPfam db_id=PF05717 from=2 to=90 evalue=2.8e-27 interpro_id=IPR008878 interpro_description=Transposase (putative), IS66 ORF2-like)
IS66 Orf2 like protein {ECO:0000313|EMBL:EKD96579.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

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