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ACD27_6

Alias: ACD27_11607.15830.16

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD27_6_1

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1..612
DNA (612bp) protein (204aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
no description (db=HMMSmart db_id=SM00530 from=2 to=63 evalue=0.0021 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD27_6_2
RIFOXYB1_FULL_OP11_Gottesmanbacteria_47_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

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852..1703
DNA (852bp) protein (284aa)
Esterase/lipase
seg (db=Seg db_id=seg from=23 to=38)
seg (db=Seg db_id=seg from=233 to=244)
seg (db=Seg db_id=seg from=84 to=100)
formamide + H2O = formate + NH3 Jill Banfield (11/15/12)
ACD27_6_3
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

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1809..2075
DNA (267bp) protein (89aa)
seg (db=Seg db_id=seg from=5 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKU28330.1}; TaxID=1618540 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF2_46_18.;"
ACD27_6_4
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

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2079..2414
DNA (336bp) protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
seg (db=Seg db_id=seg from=12 to=29)
coiled-coil (db=Coil db_id=coil from=66 to=87 evalue=NA)
coiled-coil (db=Coil db_id=coil from=39 to=60 evalue=NA)
ACD27_6_5
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

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2769..4418
DNA (1650bp) protein (550aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanyl-tRNA synthetase n=1 Tax=Treponema denticola RepID=SYA_TREDE (db=UNIREF evalue=7.0e-107 bit_score=391.0 identity=43.82 coverage=92.3636363636364)
seg (db=Seg db_id=seg from=266 to=281)
ACD27_6_6
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

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5552..6805
DNA (1254bp) protein (418aa)
seg (db=Seg db_id=seg from=394 to=406)
seg (db=Seg db_id=seg from=230 to=241)
seg (db=Seg db_id=seg from=181 to=192)
seg (db=Seg db_id=seg from=50 to=65)
ACD27_6_7

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6807..7511
DNA (705bp) protein (235aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=58 to=70)
seg (db=Seg db_id=seg from=21 to=34)
ACD27_6_8

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7508..7894
DNA (387bp) protein (129aa)
rnhD; RNase H-like ribonuclease; K07447 putative holliday junction resolvase [EC:3.1.-.-] (db=KEGG evalue=1.0e-09 bit_score=65.5 identity=36.7 coverage=78.2945736434108)
seg (db=Seg db_id=seg from=10 to=25)
UPF0081 (db=HMMPfam db_id=PF03652 from=4 to=124 evalue=1.6e-24 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=126 evalue=3.1e-23 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD27_6_9
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

Not on your lists

7935..8132
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=28 to=39)
Uncharacterized protein {ECO:0000313|EMBL:KKU43811.1}; TaxID=1618495 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
ACD27_6_10

Not on your lists

8083..9003
DNA (921bp) protein (307aa)
aminodeoxychorismate lyase
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=18 to=31)
YceG (db=HMMPfam db_id=PF02618 from=43 to=304 evalue=4.8e-63 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD27_6_11
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

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11364..12470
DNA (1107bp) protein (369aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ammonifex degensii KC4 RepID=C9R8J8_AMMDK (db=UNIREF evalue=1.0e-127 bit_score=459.0 identity=68.91 coverage=92.1409214092141)
seg (db=Seg db_id=seg from=343 to=367)
ACD27_6_12
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

Not on your lists

12418..12702
DNA (285bp) protein (95aa)
seg (db=Seg db_id=seg from=3 to=16)
seg (db=Seg db_id=seg from=24 to=46)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU28322.1}; TaxID=1618540 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF2_46_18.;"
ACD27_6_13
GWC1_OP11_46_16, Microgenomates, Bacteria

Not on your lists

12699..14756
DNA (2058bp) protein (686aa)
hypothetical protein
hypothetical protein
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=4.0e-165 bit_score=585.0 identity=50.84 coverage=84.6938775510204)
seg (db=Seg db_id=seg from=318 to=333)
ACD27_6_14

Not on your lists

14954..15868
DNA (915bp) protein (305aa)
DNA-directed RNA polymerase subunit beta'
seg (db=Seg db_id=seg from=43 to=54)
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=4 to=285 evalue=9.2e-99)
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=4 to=285 evalue=9.2e-99)
Displaying 14 items

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