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ACD11_6_240

Organism: ACD11

near complete RP 50 / 55 MC: 11 BSCG 47 / 51 MC: 2 ASCG 0 / 38
Location: comp(252666..253376)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase F similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 234.0
  • Bit_score: 222
  • Evalue 1.40e-55
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=12 to=228 evalue=2.1e-63) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-63

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAACAAATCAAATATCCAATCAGAATAAATAAGTATTTAGCTGGAAAAAATGTTTGTAGTCGAAGAGAGGCTGATACGCTTATTGAAGAAGGCAAGATTATGCTAAATGATCGTGTGGCTGTTTTGGGTGACAAAGTTAATGAAAATGATGTGGTTGGCGTTAAAGCGAAACCGGAAGAAAACTATGTTTACCTGGCTTTTCATAAACCCAAAAATGTTATTACTCACAGTCCGCAAGGCGAAGAAATTGCTATTAACAAAATAATAAATTTCCCCAAAAAAGTTTTCCCAGTGGGAAGGTTGGACAAGGATTCTTGCGGTTTGATAATCTTAACCAATGATGGTCGCATAACAGACAAATTGCTTAATCCAAAATATGAACATCAGAAAGAATATGTCGTTCATACAGATAGACCGGTTGATGCCAGATTTGTTAAAAAAATGTCTGCCGGAGTGGTTTTGGAAGATGGATATAAAACGAAGCCTTGTGTTGTCAGCAAGATAAGCAATAATGTTTTTTCAATTATTTTGACCGAAGGTAAGAATAGGCAGATTCGAAAAATGTGCGGTTTTTTTGGTTATGCAGTAACGGACTTGAAAAGAGTAAGGATTTTGAATATTGAATTGGGAGGAATAAAATCAGGACAATATAGAAAAATAAAAGGCGAAGAACTAAATATGTTTTTAGATAAATTATTTAAACAATAA
PROTEIN sequence
Length: 237
MEQIKYPIRINKYLAGKNVCSRREADTLIEEGKIMLNDRVAVLGDKVNENDVVGVKAKPEENYVYLAFHKPKNVITHSPQGEEIAINKIINFPKKVFPVGRLDKDSCGLIILTNDGRITDKLLNPKYEHQKEYVVHTDRPVDARFVKKMSAGVVLEDGYKTKPCVVSKISNNVFSIILTEGKNRQIRKMCGFFGYAVTDLKRVRILNIELGGIKSGQYRKIKGEELNMFLDKLFKQ*