Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
ribosomal large subunit pseudouridine synthase F | similarity |
KEGG
DB: KEGG |
45.3 | 234.0 | 222 | 1.40e-55 | eel:EUBELI_01202 |
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | eel:EUBELI_01202 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=12 to=228 evalue=2.1e-63) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.10e-63 | eel:EUBELI_01202 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=12 to=228 evalue=2.1e-63) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.10e-63 | eel:EUBELI_01202 |
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=69 to=223 evalue=1.1e-44 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.12e-44 | eel:EUBELI_01202 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=61 to=230 evalue=1.6e-36 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.60e-36 | eel:EUBELI_01202 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=65 to=190 evalue=1.6e-15 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-15 | eel:EUBELI_01202 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=8 to=65 evalue=7.0e-10) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.00e-10 | eel:EUBELI_01202 |
S4 (db=HMMPfam db_id=PF01479 from=9 to=53 evalue=1.3e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-07 | eel:EUBELI_01202 |
no description (db=HMMSmart db_id=SM00363 from=8 to=72 evalue=0.00011 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.10e-04 | eel:EUBELI_01202 |
S4 (db=ProfileScan db_id=PS50889 from=8 to=68 evalue=13.031 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.30e+01 | eel:EUBELI_01202 |
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 236.0 | 475 | 4.50e-131 | K2F426_9BACT | |
ribosomal large subunit pseudouridine synthase F; K06182 ribosomal large subunit pseudouridine synthase F [EC:5.4.99.12] alias=ACD11_12498.357805.29G0240,ACD11_12498.357805.29_240,ACD11_C00006G00240 id=2731 tax=ACD11 species=Eubacterium eligens genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 474 | 1.30e-131 | eel:EUBELI_01202 |