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ACD11_6_240 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ribosomal large subunit pseudouridine synthase F similarity KEGG
DB: KEGG
45.3 234.0 222 1.40e-55 eel:EUBELI_01202
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
null null null 0.0 eel:EUBELI_01202
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=12 to=228 evalue=2.1e-63) iprscan interpro
DB: HMMPanther
null null null 2.10e-63 eel:EUBELI_01202
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=12 to=228 evalue=2.1e-63) iprscan interpro
DB: HMMPanther
null null null 2.10e-63 eel:EUBELI_01202
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=69 to=223 evalue=1.1e-44 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: HMMTigr
null null null 1.12e-44 eel:EUBELI_01202
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=61 to=230 evalue=1.6e-36 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
null null null 1.60e-36 eel:EUBELI_01202
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=65 to=190 evalue=1.6e-15 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
null null null 1.60e-15 eel:EUBELI_01202
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=8 to=65 evalue=7.0e-10) iprscan interpro
DB: superfamily
null null null 7.00e-10 eel:EUBELI_01202
S4 (db=HMMPfam db_id=PF01479 from=9 to=53 evalue=1.3e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 1.30e-07 eel:EUBELI_01202
no description (db=HMMSmart db_id=SM00363 from=8 to=72 evalue=0.00011 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 1.10e-04 eel:EUBELI_01202
S4 (db=ProfileScan db_id=PS50889 from=8 to=68 evalue=13.031 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.30e+01 eel:EUBELI_01202
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 236.0 475 4.50e-131 K2F426_9BACT
ribosomal large subunit pseudouridine synthase F; K06182 ribosomal large subunit pseudouridine synthase F [EC:5.4.99.12] alias=ACD11_12498.357805.29G0240,ACD11_12498.357805.29_240,ACD11_C00006G00240 id=2731 tax=ACD11 species=Eubacterium eligens genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
100.0 null 474 1.30e-131 eel:EUBELI_01202