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ACD28_52

Alias: ACD28_36698.11338.12

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_52_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

57..566
DNA (510bp) protein (170aa)
57..566 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(593..1534)
DNA (942bp) protein (314aa)
593..1534 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1544..2491)
DNA (948bp) protein (316aa)
seg (db=Seg db_id=seg from=113 to=124)
seg (db=Seg db_id=seg from=263 to=274)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2624..3235
DNA (612bp) protein (204aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
seg (db=Seg db_id=seg from=25 to=46)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=17 to=40 evalue=0.022 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3478..4356)
DNA (879bp) protein (293aa)
seg (db=Seg db_id=seg from=49 to=67)
Pentapeptide repeat-like (db=superfamily db_id=SSF141571 from=172 to=267 evalue=5.0e-06)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

5497..6228
DNA (732bp) protein (244aa)
YD repeat protein
seg (db=Seg db_id=seg from=174 to=181)
Rhs_assc_core: RHS repeat-associated co (db=HMMTigr db_id=TIGR03696 from=3 to=78 evalue=3.2e-23 interpro_id=IPR022385 interpro_description=Rhs repeat-associated core)
integrins alpha chain alias=ACD28_36698.11338.12G0006,ACD28_36698.11338.12_6,ACD28_C00052G00006 id=31347 tax=ACD28 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
ACD28_52_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6215..6637
DNA (423bp) protein (141aa)
seg (db=Seg db_id=seg from=3 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6693..7799
DNA (1107bp) protein (369aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_52_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

9614..10267
DNA (654bp) protein (218aa)
9614..10267 + (rbs_motif=None rbs_spacer=None)
Regulator of chromosome condensation Tax=GWA2_PER_44_7
ACD28_52_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

10332..11375
DNA (1044bp) protein (348aa)
adenylate/guanylate cyclase with Chase sensor
seg (db=Seg db_id=seg from=334 to=344)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=345)
Displaying 10 items

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