ggKbase home page

ACD29_71

Alias: ACD29_424825.6594.5

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD29_71_1

Not on your lists

1..186
-----------------
DNA (186bp)
protein (62aa)
ftsY; FtsY protein
SRP54 (db=PatternScan db_id=PS00300 from=25 to=38 evalue=0.0 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS (db=HMMPanther db_id=PTHR11564 from=1 to=60 evalue=6.9e-24)
CELL DIVISION PROTEIN FTSY (db=HMMPanther db_id=PTHR11564:SF6 from=1 to=60 evalue=6.9e-24)
ACD29_71_2
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

342..686
-----------------
DNA (345bp)
protein (115aa)
ftsE; ABC transporter ATP-binding protein
Cell division ATP-binding protein n=6 Tax=Coxiella burnetii RepID=A9KBU5_COXBN (db=UNIREF evalue=5.0e-25 bit_score=116.0 identity=67.06 coverage=73.0434782608696)
seg (db=Seg db_id=seg from=86 to=114)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=92 evalue=4.3e-32)
ACD29_71_3

Not on your lists

683..916
-----------------
DNA (234bp)
protein (78aa)
Cell division ATP-binding protein FtsE n=2 Tax=Shewanella RepID=D4ZEF5_SHEVD (db=UNIREF evalue=4.0e-21 bit_score=103.0 identity=66.67 coverage=94.8717948717949)
ftsE; cell division ATP-binding protein FtsE
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=71 evalue=9.0e-26)
FILAMENTATION TEMPERATURE SENSITIVE CELL DIVISION PROTEIN FTSE (db=HMMPanther db_id=PTHR19222:SF36 from=1 to=71 evalue=9.0e-26)
ACD29_71_4

Not on your lists

894..1847
-----------------
DNA (954bp)
protein (318aa)
ftsX; cell division protein
seg (db=Seg db_id=seg from=35 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=262)
ACD29_71_5

Not on your lists

2232..3374
-----------------
DNA (1143bp)
protein (381aa)
abortive infection protein
seg (db=Seg db_id=seg from=294 to=303)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=20 to=338 evalue=2.9e-14)
Uncharacterized protein {ECO:0000313|EMBL:EKD91834.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD29_71_6

Not on your lists

3378..3932
-----------------
DNA (555bp)
protein (185aa)
3378..3932 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD91835.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD29_71_7

Not on your lists

comp(3988..4647)
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein
seg (db=Seg db_id=seg from=7 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
OMPA-like (db=superfamily db_id=SSF56925 from=35 to=219 evalue=4.1e-11)
ACD29_71_8

Not on your lists

comp(4656..5048)
-----------------
DNA (393bp)
protein (131aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD91837.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD29_71_9

Not on your lists

comp(5119..5607)
-----------------
DNA (489bp)
protein (163aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SA18_HAHCH (db=UNIREF evalue=1.0e-36 bit_score=154.0 identity=48.15 coverage=97.5460122699387)
seg (db=Seg db_id=seg from=92 to=101)
DHFR_1 (db=PatternScan db_id=PS00075 from=14 to=36 evalue=0.0 interpro_id=IPR017925 interpro_description=Dihydrofolate reductase conserved site)
ACD29_71_10

Not on your lists

5677..6627
-----------------
DNA (951bp)
protein (317aa)
Cytochrome c n=1 Tax=Rickettsiella grylli RepID=A8PL80_9COXI (db=UNIREF evalue=1.0e-82 bit_score=310.0 identity=54.86 coverage=87.3817034700316)
cycA; cytochrome c
Cytochrome c (db=superfamily db_id=SSF46626 from=17 to=165 evalue=1.7e-21 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
Cytochrome c (db=superfamily db_id=SSF46626 from=186 to=300 evalue=1.4e-12 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
2 CxxCH Jill Banfield (11/15/12)
Displaying 10 items

View Taxonomy