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ACD29_138

Alias: ACD29_395475.4964.5

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD29_138_1

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comp(1..501)
-----------------
DNA (501bp)
protein (167aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=6 Tax=Coxiella burnetii RepID=LPXB_COXB1 (db=UNIREF evalue=5.0e-36 bit_score=153.0 identity=54.27 coverage=97.6047904191617)
seg (db=Seg db_id=seg from=13 to=33)
LpxB (db=HMMPfam db_id=PF02684 from=4 to=165 evalue=2.5e-51 interpro_id=IPR003835 interpro_description=Glycosyl transferase, family 19 GO=Molecular Function: lipid-A-disaccharide synthase activity (GO:0008915), Biological Process: lipid A biosynthetic process (GO:0009245))
ACD29_138_2

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comp(545..1501)
-----------------
DNA (957bp)
protein (319aa)
oxidoreductase, NAD-binding
oxidoreductase, NAD-binding
NAD-dependent oxidoreductase n=6 Tax=Coxiella burnetii RepID=A9KC42_COXBN (db=UNIREF evalue=5.0e-105 bit_score=384.0 identity=60.44 coverage=98.7460815047022)
seg (db=Seg db_id=seg from=160 to=173)
ACD29_138_3

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1605..2204
-----------------
DNA (600bp)
protein (200aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=6 Tax=Coxiella burnetii RepID=RNH2_COXB1 (db=UNIREF evalue=1.0e-46 bit_score=189.0 identity=62.64 coverage=90.0)
seg (db=Seg db_id=seg from=11 to=25)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=5 to=187 evalue=3.9e-65 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD29_138_4
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

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2219..2689
-----------------
DNA (471bp)
protein (157aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=6 Tax=Coxiella burnetii RepID=DDL_COXBN (db=UNIREF evalue=1.0e-22 bit_score=108.0 identity=48.91 coverage=85.9872611464968)
seg (db=Seg db_id=seg from=137 to=149)
DALA_DALA_LIGASE_1 (db=PatternScan db_id=PS00843 from=106 to=117 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD29_138_5

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2701..3366
-----------------
DNA (666bp)
protein (222aa)
D-alanine--D-alanine ligase
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=142 to=170 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
Dala_Dala_lig_C (db=HMMPfam db_id=PF07478 from=2 to=196 evalue=4.4e-63 interpro_id=IPR011095 interpro_description=D-alanine--D-alanine ligase, C-terminal GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=2 to=210 evalue=8.2e-43)
ACD29_138_6

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3363..4226
-----------------
DNA (864bp)
protein (288aa)
Prolyl-tRNA synthetase n=1 Tax=Bdellovibrio bacteriovorus RepID=SYP_BDEBA (db=UNIREF evalue=2.0e-127 bit_score=458.0 identity=73.78 coverage=98.6111111111111)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF6 from=8 to=287 evalue=2.2e-153 interpro_id=IPR004499 interpro_description=Prolyl-tRNA synthetase, class IIa, prokaryotic-type GO=Molecular Function: proline-tRNA ligase activity (GO:0004827), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: prolyl-tRNA aminoacylation (GO:0006433))
ACD29_138_7

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4259..4861
-----------------
DNA (603bp)
protein (201aa)
proS; prolyl-tRNA synthetase
seg (db=Seg db_id=seg from=156 to=166)
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF6 from=1 to=200 evalue=1.6e-31 interpro_id=IPR004499 interpro_description=Prolyl-tRNA synthetase, class IIa, prokaryotic-type GO=Molecular Function: proline-tRNA ligase activity (GO:0004827), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: prolyl-tRNA aminoacylation (GO:0006433))
TRNA SYNTHETASE-RELATED (db=HMMPanther db_id=PTHR11451 from=1 to=200 evalue=1.6e-31)
ACD29_138_8

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4865..4996
-----------------
DNA (132bp)
protein (44aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
PHP (db=HMMPfam db_id=PF02811 from=5 to=42 evalue=1.2e-09 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
PHP domain-like (db=superfamily db_id=SSF89550 from=3 to=41 evalue=1.8e-06 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
DNA polymerase III subunit alpha {ECO:0000313|EMBL:EKD91899.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 8 items

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