ggKbase home page

ACD34_111

Alias: ACD34_330240.2625.6

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD34_111_1

Not on your lists

3..215
DNA (213bp) protein (71aa)
ABC transporter-like protein
METAL ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF31 from=1 to=58 evalue=1.0e-09)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=58 evalue=1.0e-09)
ABC transporter-like protein {ECO:0000313|EMBL:EKD89101.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD34_111_2

Not on your lists

comp(185..370)
DNA (186bp) protein (62aa)
185..370 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD89102.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD34_111_3

Not on your lists

comp(694..900)
DNA (207bp) protein (69aa)
694..900 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD89103.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD34_111_4

Not on your lists

1161..1673
DNA (513bp) protein (171aa)
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QX59_PIRSD (db=UNIREF evalue=8.0e-41 bit_score=169.0 identity=72.22 coverage=73.0994152046784)
seg (db=Seg db_id=seg from=72 to=84)
CSA_PPIASE_1 (db=PatternScan db_id=PS00170 from=56 to=73 evalue=0.0 interpro_id=IPR020892 interpro_description=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site GO=Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755), Biological Process: protein folding (GO:0006457))
ACD34_111_5
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..2657)
DNA (651bp) protein (217aa)
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5C9_DESAP (db=UNIREF evalue=3.0e-69 bit_score=264.0 identity=62.18 coverage=88.4792626728111)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=39 to=214 evalue=1.3e-45)
HD (db=HMMPfam db_id=PF01966 from=53 to=172 evalue=9.8e-20 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
Displaying 5 items

View Taxonomy