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ACD36_22

Alias: ACD36_217135.9230.6

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD36_22_1
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2..688)
DNA (687bp) protein (229aa)
phosphoglycerate dehydrogenase-like oxidoreductase
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=38 to=229 evalue=1.4e-47)
2-Hacid_dh_C (db=HMMPfam db_id=PF02826 from=111 to=229 evalue=6.5e-31 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=101 to=229 evalue=1.4e-27)
ACD36_22_2
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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756..1133
DNA (378bp) protein (126aa)
Mannose-6-phosphate isomerase
RmlC-like cupins (db=superfamily db_id=SSF51182 from=4 to=109 evalue=5.6e-22 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=32 to=102 evalue=3.7e-20 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=17 to=101 evalue=6.6e-13 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD36_22_3
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1113..1931)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Bacillus cereus R309803 RepID=C2QE03_BACCE (db=UNIREF evalue=5.0e-14 bit_score=82.0 identity=28.52 coverage=90.4761904761905)
hypothetical protein (db=KEGG evalue=2.0e-12 bit_score=76.3 identity=26.52 coverage=89.7435897435898)
seg (db=Seg db_id=seg from=118 to=126)
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=3 to=240 evalue=1.9e-17 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ACD36_22_4
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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2017..3141
DNA (1125bp) protein (375aa)
30S ribosomal protein S1
30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT (db=UNIREF evalue=2.0e-63 bit_score=246.0 identity=38.69 coverage=92.8)
seg (db=Seg db_id=seg from=2 to=12)
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=315 to=334 evalue=3.6e-31 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD36_22_5

Not on your lists

3175..4470
DNA (1296bp) protein (432aa)
radA; DNA repair protein RadA
radA; DNA repair protein RadA
DNA repair protein radA n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PB40_9FIRM (db=UNIREF evalue=4.0e-120 bit_score=435.0 identity=51.03 coverage=98.8425925925926)
seg (db=Seg db_id=seg from=169 to=182)
ACD36_22_6
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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4475..5269
DNA (795bp) protein (265aa)
PilT protein domain-containing protein
PilT protein domain protein n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WRP3_9BACL (db=UNIREF evalue=1.0e-51 bit_score=206.0 identity=46.79 coverage=80.7547169811321)
PIN domain-like (db=superfamily db_id=SSF88723 from=65 to=197 evalue=1.8e-18)
no description (db=HMMSmart db_id=SM00670 from=67 to=177 evalue=5.4e-07 interpro_id=IPR006596 interpro_description=Nucleotide binding protein, PINc)
ACD36_22_7
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5899..7158)
DNA (1260bp) protein (420aa)
hypothetical protein
seg (db=Seg db_id=seg from=202 to=214)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=252 evalue=3.6e-29)
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=1 to=402 evalue=4.3e-18)
ACD36_22_8
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7155..7400)
DNA (246bp) protein (82aa)
tetratricopeptide TPR_2 repeat protein (db=KEGG evalue=7.0e-11 bit_score=69.3 identity=43.42 coverage=82.9268292682927)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
glycosyl transferase family 39 alias=ACD12_417903.2192.4G0003,ACD12_417903.2192.4_3,ACD12_C00045G00003 id=3985 tax=ACD12 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=
ACD36_22_9
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7726..8820)
DNA (1095bp) protein (365aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=286)
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=312)
seg (db=Seg db_id=seg from=121 to=133)
ACD36_22_10
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

8856..9263
DNA (408bp) protein (136aa)
Chlor_Arch_YYY domain
seg (db=Seg db_id=seg from=96 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=58)
Displaying 10 items

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