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ACD36_23

Alias: ACD36_361416.5198.6

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD36_23_1
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2..196)
DNA (195bp) protein (65aa)
2..196 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_23_2
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(199..402)
DNA (204bp) protein (68aa)
199..402 - (rbs_motif=AAT rbs_spacer=7bp)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_23_3
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

485..928
DNA (444bp) protein (148aa)
seg (db=Seg db_id=seg from=24 to=35)
TrpR-like (db=superfamily db_id=SSF48295 from=1 to=104 evalue=2.0e-14 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Trp_repressor (db=HMMPfam db_id=PF01371 from=19 to=98 evalue=1.1e-12 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.1270.10 from=7 to=106 evalue=5.8e-07 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD36_23_4
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists


1012..2772
DNA (1761bp) protein (587aa)
Alanine-tRNA ligase
Alanine-tRNA ligase
Alanyl-tRNA synthetase n=1 Tax=Treponema denticola RepID=SYA_TREDE (db=UNIREF evalue=6.0e-137 bit_score=491.0 identity=45.83 coverage=95.4003407155026)
seg (db=Seg db_id=seg from=420 to=428)
ACD36_23_5
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2720..4357
DNA (1638bp) protein (546aa)
seg (db=Seg db_id=seg from=503 to=513)
seg (db=Seg db_id=seg from=321 to=334)
seg (db=Seg db_id=seg from=296 to=313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=317 to=339)
ACD36_23_6
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

4324..4821
DNA (498bp) protein (166aa)
4324..4821 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_23_7
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

4862..5230
DNA (369bp) protein (123aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
putative sortase Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
Displaying 7 items

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