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ACD38_63

Alias: ACD38_1266.11097.11

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_63_1
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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3..308
DNA (306bp) protein (102aa)
tryptophanyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=74 to=95 evalue=NA)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=2 to=100 evalue=4.6e-12)
no description (db=Gene3D db_id=G3DSA:1.10.240.10 from=1 to=65 evalue=2.0e-07)
ACD38_63_2
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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468..812
DNA (345bp) protein (115aa)
metG; methionyl-tRNA synthetase
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=113 evalue=3.6e-33 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=5 to=113 evalue=8.0e-32 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
tRNA_bind (db=HMMPfam db_id=PF01588 from=12 to=111 evalue=1.5e-25 interpro_id=IPR002547 interpro_description=tRNA-binding domain GO=Molecular Function: tRNA binding (GO:0000049))
ACD38_63_3
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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881..4009
DNA (3129bp) protein (1043aa)
hypothetical protein
hypothetical protein
Cell division protein FtsH n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFJ8_CARHZ (db=UNIREF evalue=4.0e-119 bit_score=433.0 identity=56.6 coverage=37.2962607861937)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
ACD38_63_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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4063..4323
DNA (261bp) protein (87aa)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=59 evalue=4.0e-08)
SpoVT_AbrB (db=HMMPfam db_id=PF04014 from=6 to=47 evalue=6.3e-08 interpro_id=IPR007159 interpro_description=Transcription regulator AbrB/SpoV, predicted)
lp_hng_hel_AbrB: transcriptional regu (db=HMMTigr db_id=TIGR01439 from=4 to=46 evalue=2.8e-05 interpro_id=IPR006339 interpro_description=Transcription regulator AbrB)
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KKR16366.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_63_5
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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4320..4703
DNA (384bp) protein (128aa)
hypothetical protein
PilT protein domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=D5CTM4_SIDLE (db=UNIREF evalue=2.0e-12 bit_score=75.1 identity=31.5 coverage=97.65625)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=124 evalue=1.7e-17)
PIN (db=HMMPfam db_id=PF01850 from=2 to=124 evalue=4.3e-09 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
ACD38_63_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(4700..7033)
DNA (2334bp) protein (778aa)
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6M6_HERA2 (db=UNIREF evalue=9.0e-62 bit_score=242.0 identity=30.13 coverage=68.1233933161954)
seg (db=Seg db_id=seg from=115 to=127)
AMP_BINDING (db=PatternScan db_id=PS00455 from=181 to=192 evalue=0.0 interpro_id=IPR020845 interpro_description=AMP-binding, conserved site)
ACD38_63_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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7071..7733
DNA (663bp) protein (221aa)
seg (db=Seg db_id=seg from=6 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKR16369.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_63_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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7712..8467
DNA (756bp) protein (252aa)
Glycosyl transferase family 2
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA03_9RHOB (db=UNIREF evalue=2.0e-17 bit_score=92.8 identity=29.8 coverage=96.4285714285714)
seg (db=Seg db_id=seg from=221 to=232)
seg (db=Seg db_id=seg from=189 to=200)
ACD38_63_9
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(8451..9197)
DNA (747bp) protein (249aa)
8451..9197 - (rbs_motif=TAAT rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16371.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_63_10
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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9234..10256
DNA (1023bp) protein (341aa)
seg (db=Seg db_id=seg from=13 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=61 to=331 evalue=2.2e-22 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
Glyco_hydro_42 (db=HMMPfam db_id=PF02449 from=64 to=197 evalue=2.4e-10 interpro_id=IPR013529 interpro_description=Glycoside hydrolase, family 42, N-terminal GO=Molecular Function: beta-galactosidase activity (GO:0004565), Biological Process: carbohydrate metabolic process (GO:0005975), Cellular Component: beta-galactosidase complex (GO:0009341))
ACD38_63_11

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10277..11134
DNA (858bp) protein (286aa)
DNA polymerase I
no description (db=HMMSmart db_id=SM00475 from=2 to=271 evalue=4.0e-102 interpro_id=IPR002421 interpro_description=5'-3' exonuclease, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: 5'-3' exonuclease activity (GO:0008409))
DNA POLYMERASE I (db=HMMPanther db_id=PTHR10133 from=6 to=286 evalue=7.9e-69)
no description (db=Gene3D db_id=G3DSA:3.40.50.1010 from=2 to=215 evalue=5.3e-62)
Displaying 11 items

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