ggKbase home page

ACD3_42

Alias: ACD3_218.6641.78

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_42_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(2..433)
DNA (432bp) protein (144aa)
seg (db=Seg db_id=seg from=10 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=131 evalue=2.9e-17)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=7 to=30 evalue=3.5e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD3_42_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(570..2969)
DNA (2400bp) protein (800aa)
beta propeller domain
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Beta_propel (db=HMMPfam db_id=PF09826 from=153 to=787 evalue=1.8e-101 interpro_id=IPR019198 interpro_description=Beta propeller domain)
hypothetical protein alias=ACD3_C00042G00002,ACD3_218.6641.78G0002,ACD3_218.6641.78_2 id=50488 tax=ACD3 species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5
ACD3_42_3

Not on your lists

comp(2997..4313)
DNA (1317bp) protein (439aa)
seg (db=Seg db_id=seg from=68 to=79)
Uncharacterized protein {ECO:0000313|EMBL:EKE28083.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD3_42_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

4325..4486
DNA (162bp) protein (54aa)
4325..4486 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_42_5
unknown

Not on your lists

5530..6705
DNA (1176bp) protein (392aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM (db=UNIREF evalue=6.0e-10 bit_score=68.9 identity=27.1 coverage=36.4795918367347)
peptidase M23 (db=KEGG evalue=1.0e-07 bit_score=61.6 identity=28.1 coverage=35.969387755102)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM Tax=ACD3
Displaying 5 items

View Taxonomy