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ACD40_16

Alias: ACD40_87093.2519.15

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_16_1
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

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comp(154..594)
DNA (441bp) protein (147aa)
seg (db=Seg db_id=seg from=113 to=131)
Uncharacterized protein {ECO:0000313|EMBL:KKU43356.1}; TaxID=1618495 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
ACD40_16_2

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comp(819..1118)
DNA (300bp) protein (100aa)
819..1118 - (rbs_motif=ATA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD79775.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_16_3

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comp(1289..2050)
DNA (762bp) protein (254aa)
23S RNA-specific pseudouridylate synthase
Pseudouridine synthase n=1 Tax=Leptospirillum rubarum RepID=A3EQJ0_9BACT (db=UNIREF evalue=1.0e-37 bit_score=160.0 identity=39.58 coverage=86.2204724409449)
PSI_RLU (db=PatternScan db_id=PS01129 from=67 to=81 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=3 to=241 evalue=6.8e-53 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD40_16_4

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comp(2327..2557)
DNA (231bp) protein (77aa)
DnaK suppressor protein
DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPR7_HAHCH (db=UNIREF evalue=9.0e-10 bit_score=65.9 identity=43.24 coverage=94.8051948051948)
zf-dskA_traR (db=HMMPfam db_id=PF01258 from=41 to=74 evalue=2.7e-07 interpro_id=IPR000962 interpro_description=Zinc finger, DksA/TraR C4-type GO=Molecular Function: zinc ion binding (GO:0008270))
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=43 to=76 evalue=1.0e-06)
Displaying 4 items

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