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ACD40_33

Alias: ACD40_79418.7660.11

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_33_1

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comp(3..635)
DNA (633bp) protein (211aa)
SPFH protein
seg (db=Seg db_id=seg from=185 to=196)
seg (db=Seg db_id=seg from=139 to=150)
STOMATIN-RELATED (db=HMMPanther db_id=PTHR10264 from=1 to=210 evalue=2.0e-65)
ACD40_33_2

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740..1198
DNA (459bp) protein (153aa)
740..1198 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79794.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_33_3

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comp(1242..1682)
DNA (441bp) protein (147aa)
TrpR-like (db=superfamily db_id=SSF48295 from=1 to=103 evalue=2.4e-13 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Trp_repressor (db=HMMPfam db_id=PF01371 from=18 to=96 evalue=7.6e-13 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKD79795.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_33_4

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1784..2521
DNA (738bp) protein (246aa)
seg (db=Seg db_id=seg from=17 to=30)
DNase I-like (db=superfamily db_id=SSF56219 from=1 to=242 evalue=9.7e-24 interpro_id=IPR005135 interpro_description=Endonuclease/exonuclease/phosphatase)
Exo_endo_phos (db=HMMPfam db_id=PF03372 from=3 to=241 evalue=1.7e-10 interpro_id=IPR005135 interpro_description=Endonuclease/exonuclease/phosphatase)
no description (db=Gene3D db_id=G3DSA:3.60.10.10 from=3 to=241 evalue=0.00037)
ACD40_33_5

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3353..3787
DNA (435bp) protein (145aa)
hypothetical protein
DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR11702 from=1 to=120 evalue=4.9e-16)
MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED (db=HMMPanther db_id=PTHR11702:SF3 from=1 to=120 evalue=4.9e-16 interpro_id=IPR014100 interpro_description=GTP-binding protein Obg/CgtA)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=120 evalue=2.6e-15)
ACD40_33_6

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comp(3849..4313)
DNA (465bp) protein (155aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
ACD40_33_7
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(4332..5846)
DNA (1515bp) protein (505aa)
Tetratricopeptide TPR_2
seg (db=Seg db_id=seg from=13 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=147)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=191)
ACD40_33_8

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comp(6389..6955)
DNA (567bp) protein (189aa)
seg (db=Seg db_id=seg from=81 to=95)
Uncharacterized protein {ECO:0000313|EMBL:EKD79789.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_33_9

Not on your lists

comp(7011..7697)
DNA (687bp) protein (229aa)
seg (db=Seg db_id=seg from=146 to=195)
Carbohydrate-binding domain (db=superfamily db_id=SSF49384 from=9 to=142 evalue=1.2e-07 interpro_id=IPR008965 interpro_description=Carbohydrate-binding GO=Molecular Function: carbohydrate binding (GO:0030246))
Cohesin (db=HMMPfam db_id=PF00963 from=26 to=108 evalue=1.2e-06 interpro_id=IPR002102 interpro_description=Cellulosome anchoring protein, cohesin domain GO=Biological Process: polysaccharide catabolic process (GO:0000272), Cellular Component: peptidoglycan-based cell wall (GO:0009274), Molecular Function: carbohydrate binding (GO:0030246))
Uncharacterized protein {ECO:0000313|EMBL:EKD79790.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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