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ACD40_79

Alias: ACD40_7790.8518.16

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_79_1

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comp(1..963)
DNA (963bp) protein (321aa)
DNA polymerase III subunit gamma/tau
dnaX_nterm: DNA polymerase III, subunit ga (db=HMMTigr db_id=TIGR02397 from=1 to=321 evalue=1.4e-89 interpro_id=IPR012763 interpro_description=DNA polymerase III, subunit gamma/ tau GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=30 to=236 evalue=4.1e-52)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=173 evalue=1.2e-50)
ACD40_79_2

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comp(1026..1313)
DNA (288bp) protein (96aa)
1026..1313 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79811.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_79_3

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comp(1380..1772)
DNA (393bp) protein (131aa)
hypothetical protein
seg (db=Seg db_id=seg from=23 to=33)
UPF0054 (db=HMMPfam db_id=PF02130 from=19 to=130 evalue=3.0e-23 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054 GO=Molecular Function: metallopeptidase activity (GO:0008237), Molecular Function: zinc ion binding (GO:0008270))
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=2 to=130 evalue=7.5e-23)
ACD40_79_4

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comp(1776..2219)
DNA (444bp) protein (148aa)
seg (db=Seg db_id=seg from=123 to=138)
seg (db=Seg db_id=seg from=53 to=69)
seg (db=Seg db_id=seg from=14 to=29)
coiled-coil (db=Coil db_id=coil from=4 to=25 evalue=NA)
ACD40_79_5
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(2219..2434)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=26 to=37)
seg (db=Seg db_id=seg from=46 to=57)
Ribosomal_S21 (db=HMMPfam db_id=PF01165 from=4 to=58 evalue=1.4e-10 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S21p: ribosomal protein S21 (db=HMMTigr db_id=TIGR00030 from=3 to=58 evalue=3.8e-08 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD40_79_6

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comp(2435..3283)
DNA (849bp) protein (283aa)
hypothetical protein
seg (db=Seg db_id=seg from=165 to=178)
hypothetical protein alias=ACD40_C00079G00006,ACD40_7790.8518.16G0006,ACD40_7790.8518.16_6 id=52161 tax=ACD40 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD79815.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_79_7

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comp(3319..4608)
DNA (1290bp) protein (430aa)
ATPase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AKM7_PELPD (db=UNIREF evalue=1.0e-105 bit_score=387.0 identity=46.82 coverage=98.6046511627907)
ATPase
ATPase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=203 evalue=3.6e-16)
ACD40_79_8

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comp(4655..5731)
DNA (1077bp) protein (359aa)
putative M50B family peptidase (EC:3.4.24.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=352)
seg (db=Seg db_id=seg from=5 to=13)
seg (db=Seg db_id=seg from=148 to=158)
ACD40_79_9

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comp(5732..6796)
DNA (1065bp) protein (355aa)
seg (db=Seg db_id=seg from=323 to=338)
seg (db=Seg db_id=seg from=16 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=321 to=343)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD40_79_10

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comp(6826..7272)
DNA (447bp) protein (149aa)
hypothetical protein
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=6 to=142 evalue=2.6e-31 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
Elongation factor Ts (EF-Ts), dimerisation domain (db=superfamily db_id=SSF54713 from=53 to=148 evalue=1.5e-23 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
no description (db=Gene3D db_id=G3DSA:3.30.479.20 from=56 to=148 evalue=5.3e-23 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ACD40_79_11

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comp(7269..8072)
DNA (804bp) protein (268aa)
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSE7_BACS4 (db=UNIREF evalue=1.0e-47 bit_score=193.0 identity=46.54 coverage=80.5970149253731)
seg (db=Seg db_id=seg from=183 to=195)
seg (db=Seg db_id=seg from=2 to=34)
ACD40_79_12

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comp(8151..8555)
DNA (405bp) protein (135aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
seg (db=Seg db_id=seg from=109 to=121)
THF_DHG_CYH_C (db=HMMPfam db_id=PF02882 from=17 to=133 evalue=5.5e-24 interpro_id=IPR020631 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=19 to=131 evalue=9.3e-19)
Displaying 12 items

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