ggKbase home page

ACD40_125

Alias: ACD40p_441368.14904.6

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_125_1

Not on your lists

comp(3..602)
DNA (600bp) protein (200aa)
undecaprenyl-diphospho-oligosaccharide flippase
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=127)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
ACD40_125_2

Not on your lists

comp(662..940)
DNA (279bp) protein (93aa)
seg (db=Seg db_id=seg from=39 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKD79714.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_125_3

Not on your lists

comp(933..1511)
DNA (579bp) protein (193aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
coiled-coil (db=Coil db_id=coil from=139 to=160 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD79715.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_125_4

Not on your lists

comp(1508..3130)
DNA (1623bp) protein (541aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
seg (db=Seg db_id=seg from=337 to=355)
ACD40_125_5

Not on your lists

comp(3111..4793)
DNA (1683bp) protein (561aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=381 to=403)
seg (db=Seg db_id=seg from=122 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
ACD40_125_6
R_OP11_Collierbacteria_50_25, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(4783..6342)
DNA (1560bp) protein (520aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=271 to=298)
seg (db=Seg db_id=seg from=347 to=365)
seg (db=Seg db_id=seg from=114 to=130)
ACD40_125_7

Not on your lists

comp(6960..8081)
DNA (1122bp) protein (374aa)
seg (db=Seg db_id=seg from=156 to=171)
seg (db=Seg db_id=seg from=198 to=212)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
ACD40_125_8
GWC2_OP11_44_18, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(8078..9613)
DNA (1536bp) protein (512aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=136 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=210)
ACD40_125_9

Not on your lists

9642..10292
DNA (651bp) protein (217aa)
hypothetical protein
seg (db=Seg db_id=seg from=27 to=38)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=11 to=216 evalue=1.5e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=24 to=194 evalue=1.1e-17)
ACD40_125_10

Not on your lists

comp(10472..11200)
DNA (729bp) protein (243aa)
seg (db=Seg db_id=seg from=128 to=138)
Uncharacterized protein {ECO:0000313|EMBL:EKD79707.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_125_11

Not on your lists

comp(11184..11978)
DNA (795bp) protein (265aa)
family 2 glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=14 to=257 evalue=5.6e-33)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=25 to=263 evalue=1.4e-30)
(db=HMMPfam db_id=PF00535 from=20 to=182 evalue=1.8e-24 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD40_125_12

Not on your lists

comp(11965..13371)
DNA (1407bp) protein (469aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
seg (db=Seg db_id=seg from=308 to=318)
seg (db=Seg db_id=seg from=274 to=285)
ACD40_125_13

Not on your lists

comp(13371..14831)
DNA (1461bp) protein (487aa)
seg (db=Seg db_id=seg from=9 to=21)
seg (db=Seg db_id=seg from=137 to=148)
seg (db=Seg db_id=seg from=203 to=218)
seg (db=Seg db_id=seg from=276 to=290)
ACD40_125_14

Not on your lists

comp(14828..14938)
DNA (111bp) protein (37aa)
14828..14938 - ( gc_cont=0.495)
Uncharacterized protein {ECO:0000313|EMBL:EKD79711.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

View Taxonomy