ggKbase home page

ACD40_126

Alias: ACD40p_957.12547.15

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_126_1

Not on your lists

2..778
DNA (777bp) protein (259aa)
seg (db=Seg db_id=seg from=101 to=122)
seg (db=Seg db_id=seg from=242 to=256)
seg (db=Seg db_id=seg from=181 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=33)
ACD40_126_2

Not on your lists

775..2232
DNA (1458bp) protein (486aa)
undecaprenyl-diphospho-oligosaccharide flippase
seg (db=Seg db_id=seg from=45 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=445 to=467)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=441)
ACD40_126_3

Not on your lists

2248..3153
DNA (906bp) protein (302aa)
UDP-glucose--lipopolysaccharide core heptose I 4-beta-glucosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=226 to=248)
seg (db=Seg db_id=seg from=17 to=26)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=139 evalue=6.4e-18)
ACD40_126_4
RIFOXYA2_FULL_WWE3_46_9_curated, WWE3, Bacteria

Not on your lists

3150..4073
DNA (924bp) protein (308aa)
glycosyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=7 to=261 evalue=1.4e-36)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=11 to=236 evalue=5.4e-17)
(db=HMMPfam db_id=PF00535 from=12 to=193 evalue=9.7e-16 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD40_126_5
RIFOXYA2_FULL_WWE3_46_9_curated, WWE3, Bacteria

Not on your lists

4076..5521
DNA (1446bp) protein (482aa)
Glycosyl transferase family 39
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
ACD40_126_6
RIFOXYA2_FULL_WWE3_46_9_curated, WWE3, Bacteria

Not on your lists

5508..6275
DNA (768bp) protein (256aa)
Candidate b-1,4-glucosyltransferase, Glycosyltransferase Family 2 n=1 Tax=Ramlibacter tataouinensis TTB310 RepID=F5XZ33_9BURK (db=UNIREF evalue=4.0e-28 bit_score=128.0 identity=31.95 coverage=91.40625)
family 2 glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=10 to=162 evalue=3.9e-06)
(db=HMMPfam db_id=PF00535 from=65 to=147 evalue=2.5e-05 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD40_126_7

Not on your lists

6232..7314
DNA (1083bp) protein (361aa)
hypothetical protein
Glycosyltransferase, group 1 family protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B8F7_9MICO (db=UNIREF evalue=1.0e-31 bit_score=140.0 identity=32.77 coverage=88.3656509695291)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=16 to=359 evalue=3.2e-26)
(db=HMMPfam db_id=PF00534 from=178 to=310 evalue=1.0e-18 interpro_id=IPR001296 interpro_description=Glycosyl transferase, family 1 GO=Biological Process: biosynthetic process (GO:0009058))
ACD40_126_8

Not on your lists

7311..8672
DNA (1362bp) protein (454aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=340 to=362)
transmembrane_regions (db=TMHMM db_id=tmhmm from=317 to=336)
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=310)
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
ACD40_126_9

Not on your lists

8680..9579
DNA (900bp) protein (300aa)
glycosyl transferase family protein
seg (db=Seg db_id=seg from=26 to=36)
seg (db=Seg db_id=seg from=246 to=264)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=272 evalue=1.2e-42)
ACD40_126_10

Not on your lists

9567..11201
DNA (1635bp) protein (545aa)
glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
ACD40_126_11

Not on your lists

comp(11210..11413)
DNA (204bp) protein (68aa)
11210..11413 - ( gc_cont=0.456)
Uncharacterized protein {ECO:0000313|EMBL:EKD79703.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_126_12

Not on your lists

11427..12212
DNA (786bp) protein (262aa)
alanine acetyltransferase
GNAT family acetyltransferase n=1 Tax=Desmospora sp. 8437 RepID=F5SAU5_9BACL (db=UNIREF evalue=2.0e-11 bit_score=73.6 identity=29.45 coverage=58.7786259541985)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=28 to=183 evalue=6.5e-27 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=34 to=183 evalue=5.6e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD40_126_13

Not on your lists

12265..12585
DNA (321bp) protein (107aa)
family 2 glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=3 to=106 evalue=2.9e-21)
(db=HMMPfam db_id=PF00535 from=9 to=104 evalue=3.7e-20 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=7 to=88 evalue=1.4e-12)
Displaying 13 items

View Taxonomy