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ACD41_2

Alias: ACD41_11350.8592.9

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_2_1

Not on your lists

comp(3..1667)
DNA (1665bp) protein (555aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
seg (db=Seg db_id=seg from=541 to=555)
seg (db=Seg db_id=seg from=443 to=457)
ACD41_2_2

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comp(1670..2434)
DNA (765bp) protein (255aa)
seg (db=Seg db_id=seg from=142 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Carboxypeptidase regulatory domain-like (db=superfamily db_id=SSF49464 from=173 to=230 evalue=2.7e-07 interpro_id=IPR008969 interpro_description=Carboxypeptidase-like, regulatory domain)
Cna_B (db=HMMPfam db_id=PF05738 from=186 to=230 evalue=9.9e-06 interpro_id=IPR008454 interpro_description=Collagen-binding surface protein Cna-like, B-type domain)
ACD41_2_3

Not on your lists

comp(2510..3376)
DNA (867bp) protein (289aa)
seg (db=Seg db_id=seg from=208 to=220)
Uncharacterized protein {ECO:0000313|EMBL:EKD79604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_2_4

Not on your lists

comp(3733..4443)
DNA (711bp) protein (237aa)
seg (db=Seg db_id=seg from=180 to=191)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=36 to=220 evalue=3.2e-19 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
Transposase_11 (db=HMMPfam db_id=PF01609 from=43 to=182 evalue=2.2e-10 interpro_id=IPR002559 interpro_description=Transposase, IS4-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
ACD41_2_5

Not on your lists

4622..5413
DNA (792bp) protein (264aa)
seg (db=Seg db_id=seg from=98 to=112)
Uncharacterized protein {ECO:0000313|EMBL:EKD79599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_2_6

Not on your lists

5452..7092
DNA (1641bp) protein (547aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
seg (db=Seg db_id=seg from=524 to=545)
seg (db=Seg db_id=seg from=374 to=388)
ACD41_2_7

Not on your lists

comp(7202..7570)
DNA (369bp) protein (123aa)
7202..7570 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_2_8

Not on your lists

7903..8433
DNA (531bp) protein (177aa)
seg (db=Seg db_id=seg from=136 to=148)
seg (db=Seg db_id=seg from=5 to=23)
seg (db=Seg db_id=seg from=163 to=176)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=7.0)
Displaying 8 items

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