ggKbase home page

ACD41_32

Alias: ACD41_1406.7714.19

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_32_1

Not on your lists

comp(213..368)
DNA (156bp) protein (52aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
Uncharacterized protein {ECO:0000313|EMBL:EKD79515.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_32_2

Not on your lists

436..813
DNA (378bp) protein (126aa)
hypothetical protein
DUF583 (db=HMMPfam db_id=PF04519 from=18 to=112 evalue=5.9e-22 interpro_id=IPR007607 interpro_description=Protein of unknown function DUF583)
Uncharacterized protein {ECO:0000313|EMBL:EKD79516.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF583 alias=ACD41_1406.7714.19_2,ACD41_1406.7714.19G0002,ACD41_C00032G00002 id=52906 tax=ACD41 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
ACD41_32_3

Not on your lists

820..1533
DNA (714bp) protein (238aa)
820..1533 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79517.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_32_4

Not on your lists

1549..3531
DNA (1983bp) protein (661aa)
infB; translation initiation factor IF-2
infB; translation initiation factor IF-2
Translation initiation factor IF-2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=IF2_CARHZ (db=UNIREF evalue=7.0e-125 bit_score=451.0 identity=44.35 coverage=88.8048411497731)
seg (db=Seg db_id=seg from=235 to=249)
ACD41_32_5

Not on your lists

3533..3877
DNA (345bp) protein (115aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A (db=KEGG evalue=5.0e-08 bit_score=60.1 identity=33.03 coverage=92.1739130434783)
Ribosome-binding factor A, RbfA (db=superfamily db_id=SSF89919 from=1 to=102 evalue=1.0e-14 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
RBFA (db=HMMPfam db_id=PF02033 from=5 to=107 evalue=4.3e-14 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=1 to=112 evalue=8.1e-13 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta)
ACD41_32_6

Not on your lists

3889..4875
DNA (987bp) protein (329aa)
phosphoesterase RecJ domain-containing protein
seg (db=Seg db_id=seg from=81 to=89)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=16 to=309 evalue=3.1e-49)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=7 to=316 evalue=2.0e-32)
ACD41_32_7

Not on your lists

4844..5425
DNA (582bp) protein (194aa)
clpP; ATP-dependent Clp protease proteolytic subunit
seg (db=Seg db_id=seg from=98 to=107)
CLP_PROTEASE_HIS (db=PatternScan db_id=PS00382 from=114 to=127 evalue=0.0 interpro_id=IPR018215 interpro_description=Peptidase S14, ClpP, active site GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
CLP_PROTEASE_SER (db=PatternScan db_id=PS00381 from=92 to=103 evalue=0.0 interpro_id=IPR018215 interpro_description=Peptidase S14, ClpP, active site GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
ACD41_32_8

Not on your lists

5573..7108
DNA (1536bp) protein (512aa)
HDIG/KH domain-containing protein
HDIG/KH domain-containing protein
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=CNPD_DESRM (db=UNIREF evalue=3.0e-120 bit_score=436.0 identity=46.65 coverage=92.1875)
coiled-coil (db=Coil db_id=coil from=59 to=90 evalue=NA)
ACD41_32_9

Not on your lists

7108..7752
DNA (645bp) protein (215aa)
metallophosphoesterase
no description (db=Gene3D db_id=G3DSA:3.60.21.30 from=4 to=215 evalue=3.6e-71)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=4 to=215 evalue=1.8e-62)
hypothetical protein; K09769 hypothetical protein alias=ACD41_1406.7714.19G0009,ACD41_1406.7714.19_9,ACD41_C00032G00009 id=52907 tax=ACD41 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=OD1, not OD1-i organism_desc=OD1
Displaying 9 items

View Taxonomy