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ACD41_75

Alias: ACD41_41911.8982.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_75_1

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2..1333
DNA (1332bp) protein (444aa)
putative ABC transporter substrate binding protein
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=1 to=437 evalue=1.2e-82)
SBP_bac_5 (db=HMMPfam db_id=PF00496 from=1 to=346 evalue=3.9e-61 interpro_id=IPR000914 interpro_description=Bacterial extracellular solute-binding protein, family 5 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
no description (db=Gene3D db_id=G3DSA:3.10.105.10 from=182 to=400 evalue=3.2e-36)
ACD41_75_2

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1339..3117
DNA (1779bp) protein (593aa)
RNA-metabolising metallo-beta-lactamase
seg (db=Seg db_id=seg from=116 to=128)
coiled-coil (db=Coil db_id=coil from=530 to=551 evalue=NA)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=42 to=459 evalue=2.6e-53)
ACD41_75_3

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3160..8343
DNA (5184bp) protein (1728aa)
hypothetical protein
Possible TPR repeat-containing protein (Fragment) n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BJ78_9CORY (db=UNIREF evalue=2.0e-17 bit_score=96.7 identity=42.72 coverage=10.0115740740741)
seg (db=Seg db_id=seg from=870 to=883)
seg (db=Seg db_id=seg from=815 to=833)
ACD41_75_4

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8336..8878
DNA (543bp) protein (181aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=149 to=171)
Uncharacterized protein {ECO:0000313|EMBL:EKD78779.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_75_5

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8890..9015
DNA (126bp) protein (42aa)
trpS; Tryptophan--tRNA ligase (EC:6.1.1.2)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=10 to=19 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=42 evalue=3.1e-12 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=42 evalue=7.9e-12)
Displaying 5 items

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