ggKbase home page

ACD42_112

Alias: ACD42_60888.15445.7

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD42_112_1
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
smc; chromosome partition protein
STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER (db=HMMPanther db_id=PTHR18937 from=26 to=183 evalue=4.1e-64)
STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC, BACTERIAL (db=HMMPanther db_id=PTHR18937:SF10 from=26 to=183 evalue=4.1e-64)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=185 evalue=2.9e-52)
ACD42_112_2
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(628..1530)
DNA (903bp) protein (301aa)
hypothetical protein
Sporulation and cell division repeat protein n=6 Tax=Coxiella burnetii RepID=A9NC28_COXBR (db=UNIREF evalue=8.0e-43 bit_score=177.0 identity=37.74 coverage=94.3521594684385)
seg (db=Seg db_id=seg from=74 to=85)
SEL-1-LIKE PROTEIN (db=HMMPanther db_id=PTHR11102 from=61 to=116 evalue=3.1e-10)
ACD42_112_3
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2188..3525
DNA (1338bp) protein (446aa)
23S rRNA (Uracil-5-)-methyltransferase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4P3_9GAMM (db=UNIREF evalue=1.0e-123 bit_score=446.0 identity=48.2 coverage=98.8789237668161)
TrmA family RNA methyltransferase
TrmA family RNA methyltransferase
coiled-coil (db=Coil db_id=coil from=178 to=199 evalue=NA)
ACD42_112_4
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3668..5779
DNA (2112bp) protein (704aa)
RelA/SpoT family protein
RelA/SpoT family protein
GTP pyrophosphokinase n=6 Tax=Coxiella burnetii RepID=A9KGG7_COXBN (db=UNIREF evalue=3.0e-179 bit_score=632.0 identity=47.1 coverage=94.4602272727273)
coiled-coil (db=Coil db_id=coil from=351 to=372 evalue=NA)
ACD42_112_5
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5989..7917)
DNA (1929bp) protein (643aa)
Putative membrane protein n=1 Tax=Rickettsiella grylli RepID=A8PN24_9COXI (db=UNIREF evalue=3.0e-175 bit_score=619.0 identity=49.45 coverage=99.0668740279938)
lysine-specific permease
lysine-specific permease
seg (db=Seg db_id=seg from=465 to=475)
ACD42_112_6
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..8153)
DNA (240bp) protein (80aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WPR1_9GAMM (db=UNIREF evalue=3.0e-12 bit_score=73.9 identity=42.67 coverage=92.5)
Sdh5 (db=HMMPfam db_id=PF03937 from=9 to=57 evalue=3.9e-20 interpro_id=IPR005631 interpro_description=Protein of unknown function DUF339)
no description (db=Gene3D db_id=G3DSA:1.10.150.250 from=2 to=75 evalue=2.6e-19 interpro_id=IPR005631 interpro_description=Protein of unknown function DUF339)
ACD42_112_7
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8137..9531)
DNA (1395bp) protein (465aa)
Replicative DNA helicase n=1 Tax=Rickettsiella grylli RepID=A8PLH3_9COXI (db=UNIREF evalue=3.0e-169 bit_score=598.0 identity=64.63 coverage=94.4086021505376)
dnaB; Replicative DNA helicase
dnaB; Replicative DNA helicase
seg (db=Seg db_id=seg from=312 to=320)
ACD42_112_8
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9605..10051)
DNA (447bp) protein (149aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 n=6 Tax=Coxiella burnetii RepID=RL9_COXBN (db=UNIREF evalue=3.0e-34 bit_score=147.0 identity=57.82 coverage=97.9865771812081)
seg (db=Seg db_id=seg from=52 to=71)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
ACD42_112_9
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10103..10978)
DNA (876bp) protein (292aa)
hypothetical membrane spanning protein
Hypothetical membrane spanning protein n=6 Tax=Coxiella burnetii RepID=B6J6T9_COXB1 (db=UNIREF evalue=2.0e-25 bit_score=120.0 identity=37.9 coverage=83.2191780821918)
seg (db=Seg db_id=seg from=249 to=260)
seg (db=Seg db_id=seg from=209 to=219)
ACD42_112_10
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10988..11212)
DNA (225bp) protein (75aa)
30S ribosomal protein S18 n=6 Tax=Coxiella burnetii RepID=RS18_COXBN (db=UNIREF evalue=3.0e-27 bit_score=124.0 identity=75.71 coverage=92.0)
rpsR; 30S ribosomal protein S18
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=4 to=73 evalue=1.9e-28 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=6 to=73 evalue=3.0e-27 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD42_112_11
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11229..11627)
DNA (399bp) protein (133aa)
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRQ2_9GAMM (db=UNIREF evalue=6.0e-41 bit_score=169.0 identity=68.22 coverage=79.6992481203008)
seg (db=Seg db_id=seg from=117 to=132)
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=104 evalue=2.6e-32 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD42_112_12

Not on your lists

11824..12189
DNA (366bp) protein (122aa)
membrane protein
MTH938-like (db=superfamily db_id=SSF64076 from=2 to=121 evalue=2.7e-26 interpro_id=IPR007523 interpro_description=Protein of unknown function DUF498)
DUF498 (db=HMMPfam db_id=PF04430 from=13 to=120 evalue=1.5e-25 interpro_id=IPR007523 interpro_description=Protein of unknown function DUF498)
NUCLEAR PROTEIN E3-3 (db=HMMPanther db_id=PTHR21192 from=43 to=120 evalue=3.4e-06 interpro_id=IPR007523 interpro_description=Protein of unknown function DUF498)
ACD42_112_13
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12186..13778
DNA (1593bp) protein (531aa)
Glutamine-dependent NAD(+) synthetase n=6 Tax=Coxiella burnetii RepID=B6J0K0_COXB2 (db=UNIREF evalue=4.0e-180 bit_score=635.0 identity=58.87 coverage=98.6817325800377)
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase with GAT domain (db=HMMPIR db_id=PIRSF006630 from=1 to=530 evalue=2.5e-237 interpro_id=IPR014445 interpro_description=Glutamine-dependent NAD(+) synthetase, GAT domain-containing GO=Molecular Function: NAD+ synthase (glutamine-hydrolyzing) activity (GO:0003952), Molecular Function: ATP binding (GO:0005524), Biological Process: NAD biosynthetic process (GO:0009435))
ACD42_112_14
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13775..14794)
DNA (1020bp) protein (340aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQD9_THISH (db=UNIREF evalue=5.0e-98 bit_score=361.0 identity=57.91 coverage=97.0588235294118)
seg (db=Seg db_id=seg from=60 to=74)
ACD42_112_15
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14791..15477)
DNA (687bp) protein (229aa)
aroC; chorismate synthase (EC:4.2.3.5)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=6 Tax=Coxiella burnetii RepID=AROC_COXBU (db=UNIREF evalue=5.0e-82 bit_score=306.0 identity=67.4 coverage=98.6899563318777)
seg (db=Seg db_id=seg from=187 to=196)
Displaying 15 items

View Taxonomy