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ACD42_132

Alias: ACD42_122917.9501.7

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD42_132_1

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comp(25..1086)
DNA (1062bp) protein (354aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase A n=2 Tax=Cronobacter RepID=C9XX39_CROTZ (db=UNIREF evalue=4.0e-90 bit_score=335.0 identity=45.94 coverage=96.6101694915254)
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=280 to=308 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD42_132_2
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1139..1507)
DNA (369bp) protein (123aa)
growth inhibitor
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
Cell growth inhibitor/plasmid maintenance toxic component (db=superfamily db_id=SSF50118 from=9 to=119 evalue=1.0e-22 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
PemK (db=HMMPfam db_id=PF02452 from=10 to=117 evalue=1.9e-20 interpro_id=IPR003477 interpro_description=PemK-like protein GO=Molecular Function: DNA binding (GO:0003677))
ACD42_132_3
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1479..1718)
DNA (240bp) protein (80aa)
hypothetical protein
RHH_1 (db=HMMPfam db_id=PF01402 from=5 to=38 evalue=5.1e-05 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
Uncharacterized protein n=2 Tax=spotted fever group RepID=Q4UJU6_RICFE
ACD42_132_4
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..2377)
DNA (591bp) protein (197aa)
Ribonuclease HII n=1 Tax=Saccharophagus degradans 2-40 RepID=RNH2_SACD2 (db=UNIREF evalue=7.0e-55 bit_score=216.0 identity=57.84 coverage=93.4010152284264)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=3 to=191 evalue=3.2e-67 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RNase_HII (db=HMMPfam db_id=PF01351 from=9 to=186 evalue=2.5e-50 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
ACD42_132_5
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2426..3046
DNA (621bp) protein (207aa)
NAD-dependent oxidoreductase n=6 Tax=Coxiella burnetii RepID=A9KC42_COXBN (db=UNIREF evalue=1.0e-45 bit_score=186.0 identity=52.5 coverage=76.8115942028985)
NAD-dependent oxidoreductase
seg (db=Seg db_id=seg from=175 to=184)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=16 to=151 evalue=2.5e-39)
ACD42_132_6
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2986..3435
DNA (450bp) protein (150aa)
oxidoreductase domain-containing protein
NAD-dependent oxidoreductase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
NAD-dependent oxidoreductase n=7 Tax=Coxiella burnetii RepID=A9KC42_COXBN
ACD42_132_7
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3416..4558
DNA (1143bp) protein (381aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Geobacter sulfurreducens RepID=LPXB_GEOSL (db=UNIREF evalue=1.0e-93 bit_score=347.0 identity=44.76 coverage=99.2125984251969)
seg (db=Seg db_id=seg from=17 to=29)
ACD42_132_8
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4562..5461
DNA (900bp) protein (300aa)
conserved membrane protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=272)
ACD42_132_9
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5458..6267)
DNA (810bp) protein (270aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=6 Tax=Coxiella burnetii RepID=A9KC36_COXBN (db=UNIREF evalue=3.0e-73 bit_score=278.0 identity=52.16 coverage=93.7037037037037)
lpxA; UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=3 to=31 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
Acyl-[acyl-carrier-protein]:UDP-N-acetylglucosamine O-acyltransferase (db=HMMPIR db_id=PIRSF000456 from=1 to=262 evalue=1.1e-131 interpro_id=IPR010137 interpro_description=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO=Biological Process: lipid biosynthetic process (GO:0008610), Molecular Function: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity (GO:0008780))
ACD42_132_10
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6290..6730)
DNA (441bp) protein (147aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
fabZ: beta-hydroxyacyl-(acyl-carrier-protein (db=HMMTigr db_id=TIGR01750 from=5 to=145 evalue=7.4e-76 interpro_id=IPR010084 interpro_description=Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: fatty acid biosynthetic process (GO:0006633), Molecular Function: hydro-lyase activity (GO:0016836))
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=6 to=142 evalue=1.8e-49)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=2 to=144 evalue=2.3e-43)
ACD42_132_11
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..7081)
DNA (258bp) protein (86aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=1 to=74 evalue=5.6e-13 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=1 to=60 evalue=4.4e-06)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobact
ACD42_132_12
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7078..7848)
DNA (771bp) protein (257aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
seg (db=Seg db_id=seg from=239 to=251)
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=115 to=143 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=34 to=238 evalue=6.4e-53 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
ACD42_132_13
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7870..8358)
DNA (489bp) protein (163aa)
ompH; outer membrane protein
Outer membrane protein n=6 Tax=Coxiella burnetii RepID=A9KC33_COXBN (db=UNIREF evalue=5.0e-29 bit_score=129.0 identity=44.67 coverage=91.4110429447853)
seg (db=Seg db_id=seg from=4 to=12)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD42_132_14
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8467..9534)
DNA (1068bp) protein (356aa)
yaeT; outer membrane protein assembly factor
yaeT; outer membrane protein assembly factor
Outer membrane protein assembly factor n=4 Tax=Coxiella burnetii RepID=A9KC32_COXBN (db=UNIREF evalue=3.0e-97 bit_score=358.0 identity=48.3 coverage=99.438202247191)
Bac_surface_Ag (db=HMMPfam db_id=PF01103 from=33 to=353 evalue=3.0e-52 interpro_id=IPR000184 interpro_description=Bacterial surface antigen (D15) GO=Cellular Component: outer membrane (GO:0019867))
Displaying 14 items

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