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ACD42_174

Alias: ACD42_390477.11677.6

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD42_174_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..877)
DNA (876bp) protein (292aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Arcobacter nitrofigilis DSM 7299 RepID=D5V6D6_9PROT (db=UNIREF evalue=5.0e-90 bit_score=334.0 identity=58.08 coverage=99.3150684931507)
seg (db=Seg db_id=seg from=62 to=73)
ACD42_174_2
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(874..2088)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTU3_9CHLB (db=UNIREF evalue=8.0e-148 bit_score=527.0 identity=61.5 coverage=98.0246913580247)
SAM-dependent methyltransferase
SAM-dependent methyltransferase
Methyltransf_14 (db=HMMPfam db_id=PF08484 from=231 to=398 evalue=1.2e-55 interpro_id=IPR013691 interpro_description=C-methyltransferase)
ACD42_174_3

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comp(2115..2672)
DNA (558bp) protein (186aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase(rfbC)
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=176 evalue=3.6e-72 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=179 evalue=2.0e-65 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=1 to=179 evalue=1.4e-62 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD42_174_4
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2669..4501)
DNA (1833bp) protein (611aa)
ABC transporter-like protein
ABC transporter-like protein
ABC transporter related protein n=1 Tax=Geobacter sp. M18 RepID=C6MKH7_9DELT (db=UNIREF evalue=6.0e-138 bit_score=494.0 identity=45.47 coverage=97.2176759410802)
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=288)
ACD42_174_5
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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4568..5134
DNA (567bp) protein (189aa)
rffH; glucose-1-phosphate thymidylyltransferase
Glucose-1-phosphate thymidylyltransferase n=6 Tax=Legionella pneumophila RepID=Q5ZXH1_LEGPH (db=UNIREF evalue=4.0e-53 bit_score=210.0 identity=61.85 coverage=91.005291005291)
seg (db=Seg db_id=seg from=174 to=187)
seg (db=Seg db_id=seg from=40 to=57)
ACD42_174_6
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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5202..5489
DNA (288bp) protein (96aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Geobacter lovleyi SZ RepID=B3E2F3_GEOLS (db=UNIREF evalue=8.0e-29 bit_score=129.0 identity=58.24 coverage=93.75)
glucose-1-phosphate thymidylyltransferase
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF13 from=1 to=87 evalue=1.4e-21)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=1 to=87 evalue=1.4e-21)
ACD42_174_7
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5486..6484
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase
dTDP-glucose 4,6-dehydratase
dTDP-glucose 4,6-dehydratase n=14 Tax=Francisella RepID=B2SDU2_FRATM (db=UNIREF evalue=5.0e-114 bit_score=414.0 identity=58.56 coverage=96.0960960960961)
ADH_SHORT (db=PatternScan db_id=PS00061 from=141 to=169 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
ACD42_174_8

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6459..8120
DNA (1662bp) protein (554aa)
Sulfate adenylyltransferase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJT1_RHOM4 (db=UNIREF evalue=0.0 bit_score=674.0 identity=57.76 coverage=96.2093862815885)
adenylyl-sulfate kinase (EC:2.7.1.25 2.7.7.4)
adenylyl-sulfate kinase (EC:2.7.1.25 2.7.7.4)
sopT: sulfate adenylyltransferase (db=HMMTigr db_id=TIGR00339 from=1 to=355 evalue=1.5e-147 interpro_id=IPR002650 interpro_description=Sulphate adenylyltransferase GO=Biological Process: sulfate assimilation (GO:0000103), Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781))
ACD42_174_9
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8059..9273)
DNA (1215bp) protein (405aa)
FAD dependent oxidoreductase
FAD dependent oxidoreductase
Predicted dehydrogenase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRM8_9DEIN (db=UNIREF evalue=3.0e-115 bit_score=419.0 identity=54.5 coverage=95.8024691358025)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD42_174_10

Not on your lists

comp(10347..11711)
DNA (1365bp) protein (455aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
tRNA_synt_2f (db=HMMPfam db_id=PF02092 from=4 to=316 evalue=2.4e-133 interpro_id=IPR002311 interpro_description=Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
TRNASYNTHGB (db=FPrintScan db_id=PR01045 from=11 to=26 evalue=3.7e-22 interpro_id=IPR002311 interpro_description=Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
TRNASYNTHGB (db=FPrintScan db_id=PR01045 from=83 to=99 evalue=3.7e-22 interpro_id=IPR002311 interpro_description=Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
Displaying 10 items

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