Alias: ACD42p_114397.8081.7
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD42_272_1
unknown
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Not on your lists |
comp(1..60)
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1..60 - ( gc_cont=0.467)
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ACD42_272_2
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
317..760
|
pilus biogenesis protein TapA
seg (db=Seg db_id=seg from=46 to=57)
seg (db=Seg db_id=seg from=13 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
|
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ACD42_272_3
uncultured bacterium, Bacteria
|
Not on your lists |
899..2608
|
Type II secretion system protein E n=3 Tax=Nitrosococcus RepID=Q3JEA6_NITOC (db=UNIREF evalue=3.0e-163 bit_score=579.0 identity=50.0 coverage=97.3684210526316)
type II secretion system protein E
type II secretion system protein E
T2SP_E (db=PatternScan db_id=PS00662 from=387 to=401 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
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ACD42_272_4
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2611..3840
|
pilC; type IV pilus assembly protein PilC
seg (db=Seg db_id=seg from=383 to=395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=247)
|
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ACD42_272_5
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3853..4251
|
pilus assembly protein
Pilus assembly protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5G9_9NEIS (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=48.12 coverage=96.9924812030075)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=9 to=25)
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ACD42_272_6
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4251..4586
|
Type IV pilus assembly PilZ n=3 Tax=Stenotrophomonas RepID=B4SMA7_STRM5 (db=UNIREF evalue=7.0e-10 bit_score=66.6 identity=35.35 coverage=83.9285714285714)
type IV pilus assembly PilZ
(db=HMMPfam db_id=PF07238 from=28 to=86 evalue=1.1e-05 interpro_id=IPR009875 interpro_description=PilZ domain GO=Molecular Function: cyclic-di-GMP binding (GO:0035438))
type IV pilus assembly PilZ; K02676 type IV pilus assembly protein PilZ Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
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ACD42_272_7
R_Gammaproteobacteria_39_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4610..5020
|
4610..5020 + ( gc_cont=0.389)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_39_13_curated
|
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ACD42_272_8
uncultured bacterium, Bacteria
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Not on your lists |
5017..7095
|
regulatory protein (GGDEF and EAL domains)
regulatory protein (GGDEF and EAL domains)
no description (db=HMMSmart db_id=SM00052 from=434 to=679 evalue=5.6e-92 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
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ACD42_272_9
uncultured bacterium, Bacteria
|
Not on your lists |
comp(7107..7805)
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pilF; twitching motility protein PilF
Fimbrial biogenesis and twitching motility protein PilF n=2 Tax=Legionella longbeachae RepID=D3HSK9_LEGLN (db=UNIREF evalue=2.0e-30 bit_score=135.0 identity=38.76 coverage=84.9785407725322)
seg (db=Seg db_id=seg from=215 to=226)
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ACD42_272_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(7814..8113)
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Bacterial type II and III secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUG3_9GAMM (db=UNIREF evalue=1.0e-16 bit_score=89.0 identity=51.28 coverage=77.0)
pilQ; type II/III pilus secretin
(db=HMMPfam db_id=PF00263 from=10 to=89 evalue=3.9e-24 interpro_id=IPR004846 interpro_description=Type II/III secretion system GO=Biological Process: protein secretion (GO:0009306))
Bacterial type II and III secretion system protein {ECO:0000313|EMBL:EKD76960.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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