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ACD43_61

Alias: ACD43_3059.8775.9

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD43_61_1

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comp(138..428)
DNA (291bp) protein (97aa)
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=7 to=68 evalue=7.0e-11)
DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR11076 from=10 to=80 evalue=9.0e-05 interpro_id=IPR001126 interpro_description=DNA-repair protein, UmuC-like GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA repair (GO:0006281))
Uncharacterized protein {ECO:0000313|EMBL:EKD76275.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD43_61_2

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comp(430..1032)
DNA (603bp) protein (201aa)
SOS-response transcriptional repressor, LexA
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=1 to=200 evalue=1.8e-46 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=76 to=198 evalue=3.6e-33 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=83 to=197 evalue=3.1e-32 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
ACD43_61_3

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comp(1103..2158)
DNA (1056bp) protein (352aa)
permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
transmembrane_regions (db=TMHMM db_id=tmhmm from=234 to=256)
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=283)
ACD43_61_4

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comp(2170..3165)
DNA (996bp) protein (332aa)
60 kDa lysophospholipase n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1T8_CAPGI (db=UNIREF evalue=3.0e-62 bit_score=242.0 identity=41.59 coverage=98.1927710843374)
asparaginase
ASN_GLN_ASE_2 (db=PatternScan db_id=PS00917 from=79 to=89 evalue=0.0 interpro_id=IPR020827 interpro_description=Asparaginase/glutaminase, conserved site GO=Biological Process: cellular amino acid metabolic process (GO:0006520))
ASN_GLN_ASE_1 (db=PatternScan db_id=PS00144 from=6 to=14 evalue=0.0 interpro_id=IPR020827 interpro_description=Asparaginase/glutaminase, conserved site GO=Biological Process: cellular amino acid metabolic process (GO:0006520))
ACD43_61_5

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3243..5102
DNA (1860bp) protein (620aa)
peptidase S8/S53 subtilisin kexin sedolisin
seg (db=Seg db_id=seg from=8 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=312 to=325)
ACD43_61_6

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5099..5446
DNA (348bp) protein (116aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
ACD43_61_7

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5443..6783
DNA (1341bp) protein (447aa)
UDP-N-acetylmuramyl tripeptide synthetase
FOLYLPOLYGLU_SYNT_1 (db=PatternScan db_id=PS01011 from=43 to=66 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE (db=HMMPanther db_id=PTHR23135:SF4 from=45 to=440 evalue=2.3e-79)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=45 to=440 evalue=2.3e-79)
ACD43_61_8

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7067..8809
DNA (1743bp) protein (581aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=RPOB_HELMI (db=UNIREF evalue=0.0 bit_score=678.0 identity=56.94 coverage=96.7297762478485)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=10 to=581 evalue=5.5e-160)
Displaying 8 items

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