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ACD43_98

Alias: ACD43_153304.16605.8

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD43_98_1

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2..1081
DNA (1080bp) protein (360aa)
DNA topoisomerase I (EC:5.99.1.2)
seg (db=Seg db_id=seg from=202 to=218)
seg (db=Seg db_id=seg from=270 to=290)
no description (db=Gene3D db_id=G3DSA:1.10.460.10 from=1 to=82 evalue=6.1e-20 interpro_id=IPR013824 interpro_description=DNA topoisomerase, type IA, central region, subdomain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding involved in replication (GO:0006268))
ACD43_98_2

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1126..2559
DNA (1434bp) protein (478aa)
RelA/SpoT family (p)ppGpp synthetase
RelA/SpoT family (p)ppGpp synthetase
RelA/SpoT family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R9F3_9THEO (db=UNIREF evalue=2.0e-134 bit_score=482.0 identity=50.87 coverage=96.0251046025105)
coiled-coil (db=Coil db_id=coil from=360 to=381 evalue=NA)
ACD43_98_3

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comp(2569..2883)
DNA (315bp) protein (105aa)
50S ribosomal protein L21
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=3 to=104 evalue=2.2e-30 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=1 to=96 evalue=9.2e-30 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21p-like (db=superfamily db_id=SSF141091 from=1 to=103 evalue=1.0e-27)
ACD43_98_4

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comp(2981..3472)
DNA (492bp) protein (164aa)
hypothetical protein; K09005 hypothetical protein (db=KEGG evalue=5.0e-11 bit_score=70.1 identity=33.12 coverage=92.0731707317073)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
DUF192 (db=HMMPfam db_id=PF02643 from=49 to=157 evalue=6.9e-24 interpro_id=IPR003795 interpro_description=Protein of unknown function DUF192)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
ACD43_98_5

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comp(3469..4545)
DNA (1077bp) protein (359aa)
Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LWT5_9FIRM (db=UNIREF evalue=5.0e-23 bit_score=112.0 identity=35.03 coverage=84.6796657381616)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=170)
ACD43_98_6

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comp(4558..4962)
DNA (405bp) protein (135aa)
RNAse H-fold protein YqgF
UPF0081 (db=HMMPfam db_id=PF03652 from=1 to=130 evalue=1.5e-34 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=132 evalue=9.6e-32 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.140 from=2 to=132 evalue=1.1e-28 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD43_98_7

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comp(4972..5721)
DNA (750bp) protein (250aa)
map1; methionine aminopeptidase
Methionine aminopeptidase n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08ZH6_STIAU (db=UNIREF evalue=2.0e-67 bit_score=258.0 identity=52.42 coverage=98.4)
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=2 to=249 evalue=3.0e-101 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=1 to=247 evalue=3.0e-80 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
ACD43_98_8

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comp(5718..6365)
DNA (648bp) protein (216aa)
adenylate kinase
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=88 to=99 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
adk: adenylate kinases (db=HMMTigr db_id=TIGR01351 from=9 to=215 evalue=3.5e-84 interpro_id=IPR006259 interpro_description=Adenylate kinase, subfamily GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: phosphotransferase activity, phosphate group as acceptor (GO:0016776), Molecular Function: nucleotide kinase activity (GO:0019201))
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=5 to=215 evalue=2.1e-76 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
ACD43_98_9

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comp(6352..7626)
DNA (1275bp) protein (425aa)
hypothetical protein
hypothetical protein
Preprotein translocase subunit secY n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWG2_ALKMQ (db=UNIREF evalue=2.0e-85 bit_score=319.0 identity=44.18 coverage=96.9411764705882)
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133)
ACD43_98_10

Not on your lists


comp(7608..8018)
DNA (411bp) protein (137aa)
seg (db=Seg db_id=seg from=16 to=55)
RIBOSOMAL_L15 (db=PatternScan db_id=PS00475 from=96 to=126 evalue=0.0 interpro_id=IPR001196 interpro_description=Ribosomal protein L15, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal proteins L15p and L18e (db=superfamily db_id=SSF52080 from=9 to=130 evalue=2.4e-22 interpro_id=IPR021131 interpro_description=Ribosomal protein L18e/L15)
Ribosomal_L18e (db=HMMPfam db_id=PF00828 from=29 to=131 evalue=1.2e-16 interpro_id=IPR021131 interpro_description=Ribosomal protein L18e/L15)
ACD43_98_11

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comp(8039..8524)
DNA (486bp) protein (162aa)
rpsE; 30S ribosomal subunit protein S5
ribosomal protein S5 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20C7 (db=UNIREF evalue=6.0e-35 bit_score=149.0 identity=51.45 coverage=84.5679012345679)
RIBOSOMAL_S5 (db=PatternScan db_id=PS00585 from=35 to=67 evalue=0.0 interpro_id=IPR018192 interpro_description=Ribosomal protein S5, N-terminal, conserved site)
RIBOSOMAL S SUBUNIT (db=HMMPanther db_id=PTHR13718 from=7 to=155 evalue=7.7e-51 interpro_id=IPR000851 interpro_description=Ribosomal protein S5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_12

Not on your lists


comp(8553..8906)
DNA (354bp) protein (118aa)
rplR; 50S ribosomal protein L18
seg (db=Seg db_id=seg from=105 to=113)
seg (db=Seg db_id=seg from=60 to=91)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=7 to=117 evalue=3.3e-44 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_13

Not on your lists


comp(8934..9479)
DNA (546bp) protein (182aa)
rplF; 50S ribosomal protein L6
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=176 evalue=3.0e-84 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=181 evalue=8.9e-64 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD43_98_14

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comp(9500..9823)
DNA (324bp) protein (108aa)
30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=77 to=94 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=2 to=107 evalue=1.5e-34 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=1 to=107 evalue=3.7e-31 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_15

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comp(9953..10138)
DNA (186bp) protein (62aa)
30S ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=23 to=45 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836:SF6 from=10 to=61 evalue=2.9e-26)
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=10 to=61 evalue=2.9e-26 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_16

Not on your lists


comp(10144..10683)
DNA (540bp) protein (180aa)
rplE; 50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=57 to=73 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=179 evalue=2.9e-80)
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=179 evalue=2.9e-80 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_17

Not on your lists


comp(10680..10988)
DNA (309bp) protein (103aa)
50S ribosomal protein L24
RIBOSOMAL_L24 (db=PatternScan db_id=PS01108 from=6 to=23 evalue=0.0 interpro_id=IPR005825 interpro_description=Ribosomal protein L24/L26, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=1 to=102 evalue=7.2e-32 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=102 evalue=2.1e-29 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_18

Not on your lists


comp(10994..11365)
DNA (372bp) protein (124aa)
50S ribosomal protein L14
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=123 evalue=1.4e-73 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=123 evalue=1.9e-62 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_19

Not on your lists


comp(11369..11641)
DNA (273bp) protein (91aa)
30S ribosomal protein S17
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=13 to=84 evalue=2.3e-34 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S17 (db=HMMPfam db_id=PF00366 from=18 to=84 evalue=1.2e-24 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=12 to=90 evalue=6.9e-24 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD43_98_20

Not on your lists


comp(11634..11825)
DNA (192bp) protein (64aa)
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=5 to=60 evalue=1.6e-17 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=3 to=59 evalue=4.9e-17 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=1 to=63 evalue=3.6e-15 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.10.287.310 from=1 to=59 evalue=1.3e-11 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_21

Not on your lists


comp(11830..12240)
DNA (411bp) protein (137aa)
50S ribosomal protein L16 n=2 Tax=Arthrospira RepID=B5W6S4_SPIMA (db=UNIREF evalue=7.0e-45 bit_score=182.0 identity=60.29 coverage=98.5401459854015)
rplP; 50S ribosomal protein L16
RIBOSOMAL_L16_2 (db=PatternScan db_id=PS00701 from=82 to=93 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=4.1e-72 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD43_98_22

Not on your lists


comp(13068..13379)
DNA (312bp) protein (104aa)
50S ribosomal protein L22
seg (db=Seg db_id=seg from=90 to=103)
RIBOSOMAL_L22 (db=PatternScan db_id=PS00464 from=63 to=87 evalue=0.0 interpro_id=IPR018260 interpro_description=Ribosomal protein L22/L17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=2 to=88 evalue=3.5e-26 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD43_98_23

Not on your lists


comp(13481..13816)
DNA (336bp) protein (112aa)
30S ribosomal protein S19
seg (db=Seg db_id=seg from=16 to=32)
seg (db=Seg db_id=seg from=94 to=111)
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
ACD43_98_24

Not on your lists


comp(13823..14659)
DNA (837bp) protein (279aa)
rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RL2_MOOTA (db=UNIREF evalue=6.0e-84 bit_score=314.0 identity=55.23 coverage=98.5663082437276)
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=3 to=277 evalue=3.3e-147 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
ACD43_98_25

Not on your lists


comp(14668..15093)
DNA (426bp) protein (142aa)
rplW; putative 50S ribosomal protein L23
50S ribosomal protein L23 n=3 Tax=Veillonellaceae RepID=C4V6F3_9FIRM (db=UNIREF evalue=1.0e-13 bit_score=78.6 identity=52.38 coverage=56.3380281690141)
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=52 to=139 evalue=1.0e-16 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=52 to=139 evalue=4.0e-16 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
ACD43_98_26

Not on your lists


comp(15099..15734)
DNA (636bp) protein (212aa)
rplD; LSU ribosomal protein L4p (L1e)
seg (db=Seg db_id=seg from=27 to=45)
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746:SF2 from=20 to=210 evalue=1.1e-69 interpro_id=IPR015498 interpro_description=Ribosomal protein L4)
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746 from=20 to=210 evalue=1.1e-69 interpro_id=IPR013005 interpro_description=Ribosomal protein L4/L1e, bacterial-type)
ACD43_98_27

Not on your lists


comp(15739..16362)
DNA (624bp) protein (208aa)
rplC; 50S ribosomal protein L3
L3_bact: 50S ribosomal protein L3 (db=HMMTigr db_id=TIGR03625 from=9 to=206 evalue=3.7e-77 interpro_id=IPR019927 interpro_description=Ribosomal protein L3, bacterial/organelle-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L3 (db=HMMPanther db_id=PTHR11229 from=4 to=207 evalue=2.3e-65)
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=206 evalue=1.4e-57 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel)
ACD43_98_28

Not on your lists


comp(16460..16639)
DNA (180bp) protein (60aa)
30S ribosomal protein S10P
30S RIBOSOMAL PROTEIN S10 (db=HMMPanther db_id=PTHR11700:SF2 from=1 to=59 evalue=6.6e-27 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER (db=HMMPanther db_id=PTHR11700 from=1 to=59 evalue=6.6e-27 interpro_id=IPR001848 interpro_description=Ribosomal protein S10 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S10 (db=HMMPfam db_id=PF00338 from=1 to=59 evalue=3.9e-21 interpro_id=IPR001848 interpro_description=Ribosomal protein S10 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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