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ACD45_22

Alias: ACD45_100512.46201.10

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD45_22_1

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comp(3..1574)
-----------------
DNA (1572bp)
protein (524aa)
intracellular signalling protein
Intracellular signalling protein n=3 Tax=Coxiella burnetii RepID=A9KE17_COXBN (db=UNIREF evalue=1.0e-53 bit_score=214.0 identity=28.57 coverage=94.4656488549618)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=268)
ACD45_22_2

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comp(1622..4687)
-----------------
DNA (3066bp)
protein (1022aa)
multidrug efflux transporter rbh
multidrug efflux transporter rbh
Putative multidrug efflux transporter n=1 Tax=Legionella longbeachae NSW150 RepID=D3HPR6_LEGLN (db=UNIREF evalue=0.0 bit_score=1370.0 identity=76.87 coverage=99.2172211350293)
transmembrane_regions (db=TMHMM db_id=tmhmm from=907 to=926)
ACD45_22_3

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comp(4691..5854)
-----------------
DNA (1164bp)
protein (388aa)
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MY42_9GAMM (db=UNIREF evalue=1.0e-117 bit_score=426.0 identity=58.36 coverage=96.9072164948454)
coiled-coil (db=Coil db_id=coil from=140 to=168 evalue=NA)
ACD45_22_4

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comp(5872..7371)
-----------------
DNA (1500bp)
protein (500aa)
outer membrane efflux protein
outer membrane efflux protein
RND efflux system outer membrane lipoprotein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MY41_9GAMM (db=UNIREF evalue=2.0e-146 bit_score=522.0 identity=60.84 coverage=94.2)
seg (db=Seg db_id=seg from=416 to=425)
ACD45_22_5

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7565..7732
-----------------
DNA (168bp)
protein (56aa)
7565..7732 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD74315.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_6

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7768..8148
-----------------
DNA (381bp)
protein (127aa)
7768..8148 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD74316.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_7

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comp(8162..9622)
-----------------
DNA (1461bp)
protein (487aa)
proton-translocating NADH-quinone oxidoreductase subunit N
proton-translocating NADH-quinone oxidoreductase subunit N
NADH-quinone oxidoreductase subunit N n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=NUON_THIDA (db=UNIREF evalue=6.0e-116 bit_score=421.0 identity=52.9 coverage=96.9199178644764)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
ACD45_22_8

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comp(9619..11142)
-----------------
DNA (1524bp)
protein (508aa)
nuoM; NADH-quinone oxidoreductase chain M (EC:1.6.5.3)
nuoM; NADH-quinone oxidoreductase chain M (EC:1.6.5.3)
NADH-quinone oxidoreductase, m subunit n=1 Tax=Rickettsiella grylli RepID=A8PM96_9COXI (db=UNIREF evalue=1.0e-162 bit_score=576.0 identity=65.3 coverage=95.2755905511811)
transmembrane_regions (db=TMHMM db_id=tmhmm from=303 to=325)
ACD45_22_9

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comp(11146..13119)
-----------------
DNA (1974bp)
protein (658aa)
nuoL; NADH-quinone oxidoreductase chain L
nuoL; NADH-quinone oxidoreductase chain L
NADH dehydrogenase I chain L n=5 Tax=Legionella pneumophila RepID=D5TAI5_LEGPN (db=UNIREF evalue=0.0 bit_score=716.0 identity=58.66 coverage=94.9848024316109)
seg (db=Seg db_id=seg from=6 to=17)
ACD45_22_10

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comp(13123..13428)
-----------------
DNA (306bp)
protein (102aa)
NADH dehydrogenase I subunit K (EC:1.6.5.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
ACD45_22_11

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comp(13425..14033)
-----------------
DNA (609bp)
protein (203aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 (EC:1.6.99.5)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
ACD45_22_12

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comp(14103..14591)
-----------------
DNA (489bp)
protein (163aa)
NADH dehydrogenase subunit I (EC:1.6.99.5)
seg (db=Seg db_id=seg from=16 to=30)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=63 to=74 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=102 to=113 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD45_22_13

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comp(14595..15629)
-----------------
DNA (1035bp)
protein (345aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.5.3)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit h (Nadhdehydrogenase i subunit h) (Ndh-1 subunit h) n=1 Tax=Rickettsiella grylli RepID=A8PM89_9COXI (db=UNIREF evalue=1.0e-128 bit_score=462.0 identity=71.02 coverage=90.7246376811594)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
ACD45_22_14

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comp(15626..17980)
-----------------
DNA (2355bp)
protein (785aa)
NADH-quinone oxidoreductase subunit G
NADH-quinone oxidoreductase subunit G
NADH-quinone oxidoreductase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNZ1_THISH (db=UNIREF evalue=0.0 bit_score=802.0 identity=53.09 coverage=99.3630573248408)
seg (db=Seg db_id=seg from=507 to=518)
ACD45_22_15

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comp(17956..19233)
-----------------
DNA (1278bp)
protein (426aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase I, F subunit n=8 Tax=Legionella RepID=Q5ZRU3_LEGPH (db=UNIREF evalue=0.0 bit_score=665.0 identity=73.56 coverage=97.4178403755868)
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=341 to=352 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD45_22_16

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comp(19239..19733)
-----------------
DNA (495bp)
protein (165aa)
NADH-quinone oxidoreductase subunit E
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BYT4_9GAMM (db=UNIREF evalue=6.0e-57 bit_score=222.0 identity=62.03 coverage=95.1515151515152)
COMPLEX1_24K (db=PatternScan db_id=PS01099 from=121 to=139 evalue=0.0 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
nuoE_fam: NADH-quinone oxidoreductase, E sub (db=HMMTigr db_id=TIGR01958 from=16 to=164 evalue=4.0e-83 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
ACD45_22_17

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comp(19733..20995)
-----------------
DNA (1263bp)
protein (421aa)
NADH-quinone oxidoreductase subunit D n=6 Tax=Coxiella burnetii RepID=NUOD_COXB1 (db=UNIREF evalue=0.0 bit_score=732.0 identity=81.2 coverage=98.3372921615202)
NADH dehydrogenase I subunit D (EC:1.6.99.3)
NADH dehydrogenase I subunit D (EC:1.6.99.3)
COMPLEX1_49K (db=PatternScan db_id=PS00535 from=46 to=57 evalue=0.0 interpro_id=IPR014029 interpro_description=NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site)
ACD45_22_18

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comp(20995..21666)
-----------------
DNA (672bp)
protein (224aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.5.3)
COMPLEX1_30K (db=PatternScan db_id=PS00542 from=142 to=163 evalue=0.0 interpro_id=IPR020396 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site)
NuoC_fam: NADH (or F420H2) dehydrogenase, su (db=HMMTigr db_id=TIGR01961 from=29 to=181 evalue=1.4e-59 interpro_id=IPR010218 interpro_description=NADH (or F420H2) dehydrogenase, subunit C GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation reduction (GO:0055114))
NADH-UBIQUINONE OXIDOREDUCTASE MITOCHONDRIAL PRECURSOR (db=HMMPanther db_id=PTHR10884:SF5 from=12 to=202 evalue=5.8e-55)
ACD45_22_19

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comp(21677..22159)
-----------------
DNA (483bp)
protein (161aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
seg (db=Seg db_id=seg from=106 to=119)
COMPLEX1_20K (db=PatternScan db_id=PS01150 from=119 to=135 evalue=0.0 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=11 to=154 evalue=2.7e-120 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD45_22_20

Not on your lists

comp(22150..22530)
-----------------
DNA (381bp)
protein (127aa)
NADH-quinone oxidoreductase subunit A
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
ACD45_22_21

Not on your lists

comp(22700..23086)
-----------------
DNA (387bp)
protein (129aa)
secG; Preprotein translocase SecG subunit
seg (db=Seg db_id=seg from=97 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=80 to=93)
ACD45_22_22

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comp(23147..23899)
-----------------
DNA (753bp)
protein (251aa)
triosephosphate isomerase
Triosephosphate isomerase n=1 Tax=Beggiatoa sp. PS RepID=A7C3E2_9GAMM (db=UNIREF evalue=1.0e-68 bit_score=263.0 identity=54.0 coverage=99.203187250996)
seg (db=Seg db_id=seg from=226 to=241)
TIM_1 (db=PatternScan db_id=PS00171 from=165 to=175 evalue=0.0 interpro_id=IPR020861 interpro_description=Triosephosphate isomerase, active site)
ACD45_22_23

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comp(23995..25980)
-----------------
DNA (1986bp)
protein (662aa)
seg (db=Seg db_id=seg from=41 to=56)
seg (db=Seg db_id=seg from=69 to=79)
seg (db=Seg db_id=seg from=625 to=658)
Uncharacterized protein {ECO:0000313|EMBL:EKD74333.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_24

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comp(26120..26965)
-----------------
DNA (846bp)
protein (282aa)
Cadherin-like (db=superfamily db_id=SSF49313 from=7 to=103 evalue=6.9e-06 interpro_id=IPR015919 interpro_description=Cadherin-like GO=Molecular Function: calcium ion binding (GO:0005509), Cellular Component: membrane (GO:0016020))
Uncharacterized protein {ECO:0000313|EMBL:EKD74334.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_25

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comp(27009..27245)
-----------------
DNA (237bp)
protein (79aa)
conserved hypothetical protein
FeoC (db=HMMPfam db_id=PF09012 from=2 to=70 evalue=1.2e-17 interpro_id=IPR015102 interpro_description=FeoC like transcriptional regulator)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=75 evalue=5.9e-15)
Uncharacterized protein {ECO:0000313|EMBL:EKD74335.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_26

Not on your lists

comp(27226..28989)
-----------------
DNA (1764bp)
protein (588aa)
Ferrous iron transport protein B n=6 Tax=Coxiella burnetii RepID=A9KBW8_COXBN (db=UNIREF evalue=0.0 bit_score=655.0 identity=57.47 coverage=95.2380952380952)
feoB; ferrous iron transport protein B
feoB; ferrous iron transport protein B
transmembrane_regions (db=TMHMM db_id=tmhmm from=488 to=510)
ACD45_22_27

Not on your lists

comp(29615..29848)
-----------------
DNA (234bp)
protein (78aa)
feoA2; ferrous iron transport protein A
no description (db=HMMSmart db_id=SM00899 from=1 to=74 evalue=9.2e-20 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
FeoA (db=HMMPfam db_id=PF04023 from=1 to=73 evalue=1.8e-13 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
C-terminal domain of transcriptional repressors (db=superfamily db_id=SSF50037 from=6 to=75 evalue=9.0e-07 interpro_id=IPR008988 interpro_description=Transcriptional repressor, C-terminal)
ACD45_22_28

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comp(29988..32048)
-----------------
DNA (2061bp)
protein (687aa)
coiled-coil (db=Coil db_id=coil from=132 to=160 evalue=NA)
coiled-coil (db=Coil db_id=coil from=262 to=283 evalue=NA)
seg (db=Seg db_id=seg from=5 to=20)
seg (db=Seg db_id=seg from=676 to=686)
ACD45_22_29

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32225..33973
-----------------
DNA (1749bp)
protein (583aa)
coiled-coil (db=Coil db_id=coil from=532 to=577 evalue=NA)
coiled-coil (db=Coil db_id=coil from=452 to=473 evalue=NA)
coiled-coil (db=Coil db_id=coil from=131 to=152 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD74298.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_22_30

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34113..36887
-----------------
DNA (2775bp)
protein (925aa)
seg (db=Seg db_id=seg from=630 to=639)
seg (db=Seg db_id=seg from=578 to=624)
seg (db=Seg db_id=seg from=543 to=574)
seg (db=Seg db_id=seg from=411 to=428)
Displaying items 1-30 of 41 in total

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