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ACD45_56

Alias: ACD45_2079.4402.38

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD45_56_1

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103..1308
DNA (1206bp) protein (402aa)
transposase
transmembrane_regions (db=TMHMM db_id=tmhmm from=321 to=340)
seg (db=Seg db_id=seg from=234 to=250)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=356 evalue=5.5e-35 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD45_56_2

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1526..1855
DNA (330bp) protein (110aa)
1526..1855 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD73780.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_56_3

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1849..2199
DNA (351bp) protein (117aa)
IS66 Orf2 family protein
Transposase_34 (db=HMMPfam db_id=PF05717 from=6 to=102 evalue=4.5e-29 interpro_id=IPR008878 interpro_description=Transposase (putative), IS66 Orf2 like)
Uncharacterized protein {ECO:0000313|EMBL:EKD73781.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
IS66 Orf2 family protein n=4 Tax=Gammaproteobacteria RepID=I1YFG8_METFJ
ACD45_56_4

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2241..3785
DNA (1545bp) protein (515aa)
transposase, IS66 family
transposase, IS66 family
coiled-coil (db=Coil db_id=coil from=33 to=54 evalue=NA)
Transposase_25 (db=HMMPfam db_id=PF03050 from=137 to=316 evalue=1.3e-62 interpro_id=IPR004291 interpro_description=Transposase, IS66)
ACD45_56_5

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comp(3756..4361)
DNA (606bp) protein (202aa)
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHW1_KOSOT (db=UNIREF evalue=2.0e-67 bit_score=258.0 identity=63.73 coverage=94.5544554455445)
PRiA4_ORF3 (db=HMMPfam db_id=PF07929 from=7 to=182 evalue=2.0e-63 interpro_id=IPR012912 interpro_description=Plasmid pRiA4b ORF-3-like)
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EKD73783.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

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