ggKbase home page

ACD45_71

Alias: ACD45_11980.12647.9

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD45_71_1

Not on your lists

2..124
DNA (123bp) protein (41aa)
2..124 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD74172.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_71_2

Not on your lists

comp(114..1727)
DNA (1614bp) protein (538aa)
Ankyrin repeat domain protein
seg (db=Seg db_id=seg from=496 to=507)
Ankyrin repeat (db=superfamily db_id=SSF48403 from=146 to=484 evalue=6.4e-44 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ANKYRIN REPEAT-CONTAINING (db=HMMPanther db_id=PTHR18958 from=140 to=492 evalue=8.6e-36)
ACD45_71_3

Not on your lists

comp(2226..3224)
DNA (999bp) protein (333aa)
arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ((Ara4FN transferase) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) (EC:
arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ((Ara4FN transferase) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) (EC:
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FNtransferase) (Polymyxin resistance protein PmrF) n=1 Tax=Rickettsiella grylli RepID=A8PP93_9COXI (db=UNIREF evalue=2.0e-89 bit_score=332.0 identity=57.23 coverage=92.7927927927928)
seg (db=Seg db_id=seg from=266 to=287)
ACD45_71_4

Not on your lists

3309..3941
DNA (633bp) protein (211aa)
nth; Endonuclease III (EC:4.2.99.18)
nth; Endonuclease III (EC:4.2.99.18)
Endonuclease III n=2 Tax=Legionella longbeachae RepID=D3HNQ9_LEGLN (db=UNIREF evalue=7.0e-87 bit_score=323.0 identity=69.52 coverage=99.0521327014218)
ENDONUCLEASE_III_1 (db=PatternScan db_id=PS00764 from=187 to=203 evalue=0.0 interpro_id=IPR004035 interpro_description=Endonuclease III, iron-sulphur binding site GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
ACD45_71_5

Not on your lists

5865..6302
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=3 to=15)
Uncharacterized protein {ECO:0000313|EMBL:EKD74164.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_71_6

Not on your lists

6312..7844
DNA (1533bp) protein (511aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase n=1 Tax=Rickettsiella grylli RepID=A8PLD8_9COXI (db=UNIREF evalue=1.0e-88 bit_score=331.0 identity=45.8 coverage=90.8023483365949)
seg (db=Seg db_id=seg from=337 to=355)
ACD45_71_7

Not on your lists


7888..10374
DNA (2487bp) protein (829aa)
Leucyl-tRNA synthetase n=6 Tax=Coxiella burnetii RepID=SYL_COXB1 (db=UNIREF evalue=0.0 bit_score=1075.0 identity=61.96 coverage=98.7937273823884)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
seg (db=Seg db_id=seg from=808 to=814)
ACD45_71_8

Not on your lists

10374..10895
DNA (522bp) protein (174aa)
rare lipoprotein B
seg (db=Seg db_id=seg from=2 to=14)
RplB (db=HMMPfam db_id=PF04390 from=17 to=159 evalue=9.7e-36 interpro_id=IPR007485 interpro_description=Lipopolysccharide-assembly, LptE GO=Biological Process: cellular membrane organization (GO:0016044), Biological Process: Gram-negative-bacterium-type cell outer membrane assembly (GO:0043165))
Uncharacterized protein {ECO:0000313|EMBL:EKD74167.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_71_9

Not on your lists

10892..11929
DNA (1038bp) protein (346aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=16 to=333 evalue=7.4e-75 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=211 evalue=4.7e-40)
DNA polymerase III clamp loader subunits, C-terminal domain (db=superfamily db_id=SSF48019 from=212 to=332 evalue=3.0e-31 interpro_id=IPR008921 interpro_description=DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
ACD45_71_10

Not on your lists

11946..12602
DNA (657bp) protein (219aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GV09_THISH (db=UNIREF evalue=1.0e-51 bit_score=206.0 identity=52.66 coverage=93.1506849315068)
seg (db=Seg db_id=seg from=26 to=37)
TIGR00482: nicotinate (nicotinamide) nuc (db=HMMTigr db_id=TIGR00482 from=10 to=213 evalue=6.1e-69 interpro_id=IPR005248 interpro_description=Probable nicotinate-nucleotide adenylyltransferase GO=Biological Process: NAD biosynthetic process (GO:0009435), Molecular Function: nucleotidyltransferase activity (GO:0016779))
Displaying 10 items

View Taxonomy