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ACD45_85

Alias: ACD45_36348.15084.10

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD45_85_1

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29..643
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PLL4_9COXI (db=UNIREF evalue=1.0e-18 bit_score=96.3 identity=28.16 coverage=98.5365853658537)
hypothetical protein (db=KEGG evalue=5.0e-17 bit_score=90.5 identity=31.55 coverage=95.1219512195122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
seg (db=Seg db_id=seg from=31 to=44)
ACD45_85_2
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

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637..2349
DNA (1713bp) protein (571aa)
type IV secretion-system coupling DNA-binding domain protein
Type IV secretory pathway VirD4 components-like protein n=5 Tax=Thermoanaerobacter RepID=B0KAY5_THEP3 (db=UNIREF evalue=1.0e-65 bit_score=254.0 identity=37.87 coverage=72.8546409807356)
seg (db=Seg db_id=seg from=41 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
ACD45_85_3

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comp(2433..3059)
DNA (627bp) protein (209aa)
2433..3059 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD73156.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_85_4

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3261..4178
DNA (918bp) protein (306aa)
seg (db=Seg db_id=seg from=184 to=199)
coiled-coil (db=Coil db_id=coil from=244 to=272 evalue=NA)
seg (db=Seg db_id=seg from=285 to=302)
ADP-ribosylation (db=superfamily db_id=SSF56399 from=68 to=181 evalue=5.1e-08)
ACD45_85_5

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comp(4589..4840)
DNA (252bp) protein (84aa)
octaprenyl-diphosphate synthase
Terpenoid synthases (db=superfamily db_id=SSF48576 from=1 to=83 evalue=9.0e-15 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
no description (db=Gene3D db_id=G3DSA:1.10.600.10 from=1 to=83 evalue=3.9e-09 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
SOLANESYL DIPHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR12001:SF18 from=28 to=81 evalue=4.0e-08 interpro_id=IPR014120 interpro_description=Solanesyl diphosphate synthase GO=Cellular Component: cyanelle (GO:0009842), Biological Process: photosynthesis (GO:0015979), Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
ACD45_85_6

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5800..6108
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Tolumonas auensis DSM 9187 RepID=RL21_TOLAT (db=UNIREF evalue=1.0e-33 bit_score=145.0 identity=66.34 coverage=97.0873786407767)
50S ribosomal protein L21
RIBOSOMAL_L21 (db=PatternScan db_id=PS01169 from=72 to=94 evalue=0.0 interpro_id=IPR018258 interpro_description=Ribosomal protein L21, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=2 to=102 evalue=1.0e-50 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD45_85_7

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6132..6407
DNA (276bp) protein (92aa)
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 n=5 Tax=Legionella pneumophila RepID=RL27_LEGPA (db=UNIREF evalue=1.0e-30 bit_score=135.0 identity=74.73 coverage=97.8260869565217)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L27: ribosomal protein L27 (db=HMMTigr db_id=TIGR00062 from=1 to=83 evalue=2.5e-43 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD45_85_8

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6588..7559
DNA (972bp) protein (324aa)
obgE; GTPase ObgE
obgE; GTPase ObgE
GTPase obg n=1 Tax=Hahella chejuensis KCTC 2396 RepID=OBG_HAHCH (db=UNIREF evalue=3.0e-102 bit_score=375.0 identity=62.46 coverage=92.5925925925926)
seg (db=Seg db_id=seg from=4 to=15)
ACD45_85_9

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7773..8378
DNA (606bp) protein (202aa)
enhA.1; enhanced entry protein
Enhanced entry protein n=6 Tax=Coxiella burnetii RepID=A9KGP8_COXBN (db=UNIREF evalue=6.0e-36 bit_score=153.0 identity=51.43 coverage=67.8217821782178)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=70 to=199 evalue=3.9e-21)
YkuD (db=HMMPfam db_id=PF03734 from=74 to=198 evalue=4.5e-10 interpro_id=IPR005490 interpro_description=YkuD domain)
ACD45_85_10

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comp(8432..8764)
DNA (333bp) protein (111aa)
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=RS20_HAMD5 (db=UNIREF evalue=5.0e-27 bit_score=123.0 identity=68.13 coverage=81.0810810810811)
seg (db=Seg db_id=seg from=92 to=109)
S20: ribosomal protein S20 (db=HMMTigr db_id=TIGR00029 from=1 to=87 evalue=4.7e-42 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD45_85_11

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8878..10428
DNA (1551bp) protein (517aa)
integral membrane protein MviN
integral membrane protein MviN
Putative uncharacterized protein n=4 Tax=Legionella pneumophila RepID=Q5WTG4_LEGPL (db=UNIREF evalue=6.0e-142 bit_score=508.0 identity=54.96 coverage=97.2920696324952)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
ACD45_85_12

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comp(10432..11040)
DNA (609bp) protein (203aa)
10432..11040 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD73152.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD45_85_13

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11695..12132
DNA (438bp) protein (146aa)
riboflavin kinase / FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
no description (db=HMMSmart db_id=SM00904 from=16 to=140 evalue=9.8e-60 interpro_id=IPR015865 interpro_description=Riboflavin kinase GO=Molecular Function: riboflavin kinase activity (GO:0008531), Biological Process: riboflavin biosynthetic process (GO:0009231))
Riboflavin kinase-like (db=superfamily db_id=SSF82114 from=6 to=140 evalue=9.1e-45 interpro_id=IPR015865 interpro_description=Riboflavin kinase GO=Molecular Function: riboflavin kinase activity (GO:0008531), Biological Process: riboflavin biosynthetic process (GO:0009231))
Flavokinase (db=HMMPfam db_id=PF01687 from=16 to=139 evalue=3.7e-40 interpro_id=IPR015865 interpro_description=Riboflavin kinase GO=Molecular Function: riboflavin kinase activity (GO:0008531), Biological Process: riboflavin biosynthetic process (GO:0009231))
ACD45_85_14

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12132..14945
DNA (2814bp) protein (938aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucyl-tRNA synthetase n=2 Tax=Nitrosococcus oceani RepID=SYI_NITOC (db=UNIREF evalue=0.0 bit_score=1238.0 identity=62.17 coverage=99.7867803837953)
seg (db=Seg db_id=seg from=238 to=247)
ACD45_85_15

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14938..15120
DNA (183bp) protein (61aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=10 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
Peptidase_A8 (db=HMMPfam db_id=PF01252 from=15 to=61 evalue=8.8e-07 interpro_id=IPR001872 interpro_description=Peptidase A8, signal peptidase II GO=Molecular Function: aspartic-type endopeptidase activity (GO:0004190), Biological Process: proteolysis (GO:0006508), Cellular Component: membrane (GO:0016020))
Displaying 15 items

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