ggKbase home page

ACD45_280

Alias: ACD45_74889.1974.5

Search features with annotation key words

Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD45_280_1
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=41 to=58)
HemY_N (db=HMMPfam db_id=PF07219 from=1 to=112 evalue=1.7e-17 interpro_id=IPR010817 interpro_description=HemY, N-terminal)
ACD45_280_2
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(591..1310)
DNA (720bp) protein (240aa)
coiled-coil (db=Coil db_id=coil from=63 to=84 evalue=NA)
seg (db=Seg db_id=seg from=82 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
HemX (db=HMMPfam db_id=PF04375 from=69 to=228 evalue=2.8e-13 interpro_id=IPR007470 interpro_description=HemX)
ACD45_280_3
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..2008)
DNA (723bp) protein (241aa)
Uroporphyrinogen III synthase HEM4
Uroporphyrinogen III synthase HEM4 n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RMK1_ALLVD (db=UNIREF evalue=5.0e-21 bit_score=104.0 identity=37.18 coverage=92.9460580912863)
seg (db=Seg db_id=seg from=115 to=131)
HemD-like (db=superfamily db_id=SSF69618 from=1 to=231 evalue=3.9e-39 interpro_id=IPR003754 interpro_description=Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO=Molecular Function: uroporphyrinogen-III synthase activity (GO:0004852), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
Displaying 3 items

View Taxonomy