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ACD13_43

Alias: ACD13_2523.8416.22

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_43_1

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comp(3..635)
DNA (633bp) protein (211aa)
TPR repeat-containing protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D4Y0Z0_9CHLR (db=UNIREF evalue=4.0e-27 bit_score=124.0 identity=36.18 coverage=92.4170616113744)
hypothetical protein
TPR-like (db=superfamily db_id=SSF48452 from=9 to=91 evalue=7.4e-11)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=9 to=82 evalue=3.8e-06 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
ACD13_43_2

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741..1478
DNA (738bp) protein (246aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=62 to=83 evalue=NA)
coiled-coil (db=Coil db_id=coil from=96 to=117 evalue=NA)
YebC-like (db=superfamily db_id=SSF75625 from=5 to=243 evalue=4.6e-81 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD13_43_3
GWB1_OP11_40_12_partial, Woesebacteria, Microgenomates, Bacteria

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1487..2404
DNA (918bp) protein (306aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=287 to=304)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
ACD13_43_4

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3347..4093
DNA (747bp) protein (249aa)
NT5C (db=HMMPfam db_id=PF06941 from=24 to=157 evalue=2.0e-09 interpro_id=IPR010708 interpro_description=5'(3')-deoxyribonucleotidase GO=Molecular Function: phosphatase activity (GO:0016791))
Uncharacterized protein {ECO:0000313|EMBL:EKE13079.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_43_5

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4129..5085
DNA (957bp) protein (319aa)
Tyrosine recombinase XerD
seg (db=Seg db_id=seg from=168 to=179)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=120 to=313 evalue=1.9e-54 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=125 to=309 evalue=2.3e-52 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD13_43_6

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5085..5312
DNA (228bp) protein (76aa)
5085..5312 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE13081.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_43_7

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5349..5861
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BKM5_9GAMM (db=UNIREF evalue=8.0e-09 bit_score=62.8 identity=28.05 coverage=89.4736842105263)
seg (db=Seg db_id=seg from=103 to=114)
Uncharacterized protein {ECO:0000313|EMBL:EKE13082.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_43_8

Not on your lists

comp(5868..6635)
DNA (768bp) protein (256aa)
hypothetical protein
seg (db=Seg db_id=seg from=16 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=186 to=201)
ACD13_43_9

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comp(6673..8454)
DNA (1782bp) protein (594aa)
DNA gyrase subunit A
seg (db=Seg db_id=seg from=573 to=584)
seg (db=Seg db_id=seg from=201 to=214)
coiled-coil (db=Coil db_id=coil from=190 to=223 evalue=NA)
Displaying 9 items

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