Alias: ACD46_24096.4485.8
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD46_76_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..432)
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seg (db=Seg db_id=seg from=85 to=99)
seg (db=Seg db_id=seg from=35 to=58)
seg (db=Seg db_id=seg from=17 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
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ACD46_76_2
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
551..1303
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transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=217)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
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ACD46_76_3
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1395..1760
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AhpD-like (db=superfamily db_id=SSF69118 from=7 to=117 evalue=3.9e-10)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
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ACD46_76_4
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1776..1970
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4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase n=1 Tax=Pseudomonas putida KT2440 RepID=Q88JY9_PSEPK (db=UNIREF evalue=6.0e-11 bit_score=69.7 identity=50.77 coverage=96.9230769230769)
Tautomerase (db=HMMPfam db_id=PF01361 from=2 to=57 evalue=1.3e-16 interpro_id=IPR004370 interpro_description=4-oxalocrotonate tautomerase GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: isomerase activity (GO:0016853))
Tautomerase/MIF (db=superfamily db_id=SSF55331 from=2 to=61 evalue=9.7e-14)
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ACD46_76_5
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2037..2837)
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possible Pirin family proteins
RmlC-like cupins (db=superfamily db_id=SSF51182 from=29 to=264 evalue=6.4e-27 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Pirin (db=HMMPfam db_id=PF02678 from=68 to=150 evalue=7.4e-09 interpro_id=IPR003829 interpro_description=Pirin, N-terminal)
PIRIN-RELATED (db=HMMPanther db_id=PTHR13903 from=84 to=256 evalue=3.6e-07 interpro_id=IPR012093 interpro_description=Pirin)
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ACD46_76_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2860..3030)
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rubredoxin-type Fe(Cys)4 protein
Rubredoxin reductase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KG87_9GAMM (db=UNIREF evalue=9.0e-16 bit_score=85.9 identity=61.54 coverage=89.4736842105263)
RUBREDOXIN (db=PatternScan db_id=PS00202 from=33 to=43 evalue=0.0 interpro_id=IPR018527 interpro_description=Rubredoxin, iron-binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=1 to=53 evalue=1.2e-18)
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ACD46_76_7
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3051..3419)
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pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
AhpD-like (db=superfamily db_id=SSF69118 from=1 to=120 evalue=2.5e-21)
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ACD46_76_8
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3577..4518)
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2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase family oxidoreductase n=2 Tax=Legionella longbeachae RepID=D1RH49_LEGLO (db=UNIREF evalue=2.0e-93 bit_score=345.0 identity=61.51 coverage=92.3566878980892)
seg (db=Seg db_id=seg from=1 to=20)
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confirm with phylogeny: may encode P3N monooxygenase rather than 2-nitropropane dioxygenase
kelly wrighton
(11/15/12)
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