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ACD46_89

Alias: ACD46_26166.35000.11

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD46_89_1

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comp(3..416)
DNA (414bp) protein (138aa)
radical SAM protein
B12-binding (db=HMMPfam db_id=PF02310 from=26 to=136 evalue=1.2e-19 interpro_id=IPR006158 interpro_description=Cobalamin (vitamin B12)-binding GO=Molecular Function: cobalamin binding (GO:0031419), Molecular Function: metal ion binding (GO:0046872))
B12_BINDING (db=ProfileScan db_id=PS51332 from=14 to=138 evalue=20.547 interpro_id=IPR006158 interpro_description=Cobalamin (vitamin B12)-binding GO=Molecular Function: cobalamin binding (GO:0031419), Molecular Function: metal ion binding (GO:0046872))
Radical SAM protein {ECO:0000313|EMBL:EKD71174.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_2

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comp(420..797)
DNA (378bp) protein (126aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
seg (db=Seg db_id=seg from=42 to=60)
ACD46_89_3

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comp(1761..2618)
DNA (858bp) protein (286aa)
Surface polysaccharide biosynthesis protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1T2_ACIC5 (db=UNIREF evalue=3.0e-29 bit_score=132.0 identity=30.34 coverage=95.8041958041958)
surface polysaccharide biosynthesis protein
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=247 evalue=3.6e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=6 to=228 evalue=5.0e-21 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD46_89_4

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comp(2615..4108)
DNA (1494bp) protein (498aa)
choline dehydrogenase-like flavoprotein
seg (db=Seg db_id=seg from=261 to=274)
seg (db=Seg db_id=seg from=222 to=234)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=188 to=199 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD46_89_5

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comp(4111..4980)
DNA (870bp) protein (290aa)
glycosyl transferase family 2
transmembrane_regions (db=TMHMM db_id=tmhmm from=172 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=258 to=280)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
ACD46_89_6

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comp(4985..6877)
DNA (1893bp) protein (631aa)
Asparagine synthase, glutamine-hydrolyzing n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U189_9PROT (db=UNIREF evalue=2.0e-127 bit_score=460.0 identity=40.6 coverage=97.4643423137876)
asparagine synthase
asparagine synthase
coiled-coil (db=Coil db_id=coil from=235 to=263 evalue=NA)
ACD46_89_7

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comp(6856..7881)
DNA (1026bp) protein (342aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RVX0_ALLVD (db=UNIREF evalue=5.0e-112 bit_score=407.0 identity=57.57 coverage=97.3684210526316)
nucleotide sugar epimerase
seg (db=Seg db_id=seg from=242 to=252)
UDP-GLUCURONATE 5-EPIMERASE (db=HMMPanther db_id=PTHR10366:SF42 from=5 to=330 evalue=7.8e-153)
ACD46_89_8

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7943..8185
DNA (243bp) protein (81aa)
seg (db=Seg db_id=seg from=59 to=69)
Uncharacterized protein {ECO:0000313|EMBL:EKD71157.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_9

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comp(8180..8833)
DNA (654bp) protein (218aa)
hypothetical protein
Formyltransferase (db=superfamily db_id=SSF53328 from=7 to=165 evalue=2.7e-14 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
Formyl_trans_N (db=HMMPfam db_id=PF00551 from=42 to=122 evalue=5.8e-07 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=45 to=174 evalue=3.5e-06 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD46_89_10

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comp(8842..9930)
DNA (1089bp) protein (363aa)
pseudaminic acid biosynthesis-associated protein PseG
PseG: pseudaminic acid biosynthesis-associat (db=HMMTigr db_id=TIGR03590 from=1 to=303 evalue=4.9e-113 interpro_id=IPR020023 interpro_description=Pseudaminic acid biosynthesis-associated protein PseG)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=222 to=362 evalue=6.7e-11)
Glyco_tran_28_C (db=HMMPfam db_id=PF04101 from=224 to=293 evalue=3.1e-07 interpro_id=IPR007235 interpro_description=Glycosyl transferase, family 28, C-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758), Molecular Function: carbohydrate binding (GO:0030246), Biological Process: lipid glycosylation (GO:0030259))
ACD46_89_11

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comp(9995..11551)
DNA (1557bp) protein (519aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31AA2_PROM9 (db=UNIREF evalue=3.0e-37 bit_score=160.0 identity=33.42 coverage=73.6030828516378)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=452 to=468)
ACD46_89_12

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11693..12670
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C256_NITHN (db=UNIREF evalue=2.0e-63 bit_score=246.0 identity=41.3 coverage=96.319018404908)
NAD-dependent epimerase/dehydratase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=3 to=321 evalue=3.1e-69)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=6 to=323 evalue=1.4e-67)
ACD46_89_13

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12667..13677
DNA (1011bp) protein (337aa)
glycosyl transferase, group 4 (EC:2.7.8.-)
Glycosyl transferase, group 4 family protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZ00_SYNWW (db=UNIREF evalue=3.0e-51 bit_score=205.0 identity=45.21 coverage=83.3827893175074)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=320)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
ACD46_89_14

Not on your lists

comp(13669..14901)
DNA (1233bp) protein (411aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD71163.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
LA1599-like protein n=1 Tax=Leptospira interrogans RepID=Q2I7G8_LEPIN alias=ACD79_C00051G00008,ACD79_5943.26061.12G0008,ACD79_5943.26061.12_8 id=125367 tax=ACD79 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD46_89_15

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comp(14923..15714)
DNA (792bp) protein (264aa)
seg (db=Seg db_id=seg from=158 to=169)
Clavaminate synthase-like (db=superfamily db_id=SSF51197 from=9 to=253 evalue=5.7e-12)
PhyH (db=HMMPfam db_id=PF05721 from=117 to=233 evalue=0.00013 interpro_id=IPR008775 interpro_description=Phytanoyl-CoA dioxygenase)
Uncharacterized protein {ECO:0000313|EMBL:EKD71164.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_16

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comp(15749..16951)
DNA (1203bp) protein (401aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=9 to=212 evalue=1.8e-13)
Uncharacterized protein {ECO:0000313|EMBL:EKD71165.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4BX28_CROWT
ACD46_89_17

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comp(16952..17470)
DNA (519bp) protein (173aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD71166.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=2 Tax=Chroococcales RepID=Q4BX29_CROWT
ACD46_89_18

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comp(17460..18032)
DNA (573bp) protein (191aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJR6_PETMO (db=UNIREF evalue=2.0e-48 bit_score=194.0 identity=48.37 coverage=95.2879581151832)
hexapaptide repeat-containing transferase
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=13 to=173 evalue=5.3e-25 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=10 to=173 evalue=1.4e-24)
ACD46_89_19

Not on your lists

comp(18034..18285)
DNA (252bp) protein (84aa)
ACP-like (db=superfamily db_id=SSF47336 from=2 to=77 evalue=6.5e-06 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
Uncharacterized protein {ECO:0000313|EMBL:EKD71168.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_20

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comp(18272..19969)
DNA (1698bp) protein (566aa)
FkbH like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G6D9_GEOUR (db=UNIREF evalue=5.0e-82 bit_score=309.0 identity=33.02 coverage=93.9929328621908)
subfamily IIIC HAD-superfamily phosphatase
subfamily IIIC HAD-superfamily phosphatase
FkbH: FkbH domain (db=HMMTigr db_id=TIGR01686 from=204 to=529 evalue=2.3e-70 interpro_id=IPR010037 interpro_description=FkbH)
ACD46_89_21

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comp(20024..21322)
DNA (1299bp) protein (433aa)
COG0161: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384B57 (db=UNIREF evalue=2.0e-146 bit_score=523.0 identity=55.97 coverage=98.3833718244804)
putative uncharacterized protein
seg (db=Seg db_id=seg from=77 to=84)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=12 to=425 evalue=5.0e-92 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
ACD46_89_22

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comp(21335..22018)
DNA (684bp) protein (228aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=9 to=172 evalue=1.4e-14)
Methyltransf_12 (db=HMMPfam db_id=PF08242 from=61 to=156 evalue=1.5e-08 interpro_id=IPR013217 interpro_description=Methyltransferase type 12)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=58 to=162 evalue=0.00098)
ACD46_89_23

Not on your lists

comp(22129..24369)
DNA (2241bp) protein (747aa)
exopolysaccharide transport family protein
exopolysaccharide transport family protein
Chain length determinant protein n=1 Tax=Nitrosomonas europaea RepID=Q82SN1_NITEU (db=UNIREF evalue=7.0e-97 bit_score=358.0 identity=32.31 coverage=94.3775100401606)
seg (db=Seg db_id=seg from=732 to=745)
ACD46_89_24

Not on your lists

comp(24372..24677)
DNA (306bp) protein (102aa)
Polysaccharide export protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AE91_NITEC (db=UNIREF evalue=7.0e-16 bit_score=86.3 identity=41.46 coverage=79.4117647058823)
polysaccharide export protein
Uncharacterized protein {ECO:0000313|EMBL:EKD71173.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_25

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comp(25275..25718)
DNA (444bp) protein (148aa)
protein tyrosine phosphatase
no description (db=HMMSmart db_id=SM00226 from=4 to=145 evalue=2.7e-41 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein amino acid dephosphorylation (GO:0006470))
Phosphotyrosine protein phosphatases I (db=superfamily db_id=SSF52788 from=1 to=147 evalue=2.6e-37 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein amino acid dephosphorylation (GO:0006470))
LMWPc (db=HMMPfam db_id=PF01451 from=4 to=143 evalue=8.1e-37 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein amino acid dephosphorylation (GO:0006470))
ACD46_89_26

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comp(25829..26845)
DNA (1017bp) protein (339aa)
Methicillin resistance protein
Methicillin resistance protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI85_HELMI (db=UNIREF evalue=5.0e-17 bit_score=92.0 identity=27.3 coverage=77.8761061946903)
seg (db=Seg db_id=seg from=284 to=295)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=141 to=320 evalue=1.6e-33 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD46_89_27

Not on your lists

comp(26871..28013)
DNA (1143bp) protein (381aa)
putative GT4 : distantly related to phosphatidylinositol a-mannosyltransferase
seg (db=Seg db_id=seg from=164 to=175)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=3 to=378 evalue=1.0e-40)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=378 evalue=1.6e-28)
ACD46_89_28

Not on your lists

comp(28017..28796)
DNA (780bp) protein (260aa)
polysaccharide deacetylase family protein
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=32 to=241 evalue=5.3e-30 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
Polysacc_deac_1 (db=HMMPfam db_id=PF01522 from=71 to=208 evalue=3.1e-28 interpro_id=IPR002509 interpro_description=Polysaccharide deacetylase GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
Polysaccharide deacetylase {ECO:0000313|EMBL:EKD71145.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD46_89_29

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comp(28844..30037)
DNA (1194bp) protein (398aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PY89_9BACT (db=UNIREF evalue=2.0e-155 bit_score=552.0 identity=66.49 coverage=93.4673366834171)
putative epimerase
putative epimerase
ROK FAMILY (db=HMMPanther db_id=PTHR18964 from=26 to=381 evalue=5.4e-120)
ACD46_89_30

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comp(30025..30927)
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M8Z3_GEOSF (db=UNIREF evalue=9.0e-86 bit_score=320.0 identity=56.43 coverage=92.358803986711)
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=289 evalue=1.2e-49)
Displaying items 1-30 of 34 in total

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