ggKbase home page

ACD46_98

Alias: ACD46_456058.4115.5

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD46_98_1
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31..1266)
DNA (1236bp) protein (412aa)
plasmid replication initiation protein
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N529_9GAMM (db=UNIREF evalue=5.0e-54 bit_score=215.0 identity=33.17 coverage=95.1456310679612)
Rep_3 (db=HMMPfam db_id=PF01051 from=1 to=206 evalue=5.0e-28 interpro_id=IPR000525 interpro_description=Initiator Rep protein GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Cellular Component: extrachromosomal circular DNA (GO:0005727), Biological Process: DNA replication initiation (GO:0006270))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=111 to=212 evalue=9.6e-26)
ACD46_98_2
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2044..2640
DNA (597bp) protein (199aa)
ParA partition protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=23 to=193 evalue=2.8e-15)
CbiA (db=HMMPfam db_id=PF01656 from=36 to=153 evalue=1.2e-11 interpro_id=IPR002586 interpro_description=Cobyrinic acid a,c-diamide synthase)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=47 to=193 evalue=7.2e-08)
ACD46_98_3
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2630..3403
DNA (774bp) protein (258aa)
parB; Probable chromosome-partitioning protein parB
seg (db=Seg db_id=seg from=239 to=254)
seg (db=Seg db_id=seg from=157 to=162)
seg (db=Seg db_id=seg from=195 to=207)
ACD46_98_4
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3400..3672
DNA (273bp) protein (91aa)
3400..3672 + (rbs_motif=None rbs_spacer=None)
parB; chromosome-partitioning protein parB Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
ACD46_98_5
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3666..4019
DNA (354bp) protein (118aa)
3666..4019 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
Displaying 5 items

View Taxonomy