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ACD46_325

Alias: ACD46_532496.3454.8

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD46_325_1

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comp(260..685)
DNA (426bp) protein (142aa)
50S ribosomal protein L19 n=7 Tax=Pseudomonadaceae RepID=RL19_AZOVD (db=UNIREF evalue=2.0e-46 bit_score=187.0 identity=77.78 coverage=80.2816901408451)
rplS; 50S ribosomal protein L19
seg (db=Seg db_id=seg from=128 to=141)
RIBOSOMAL_L19 (db=PatternScan db_id=PS01015 from=89 to=104 evalue=0.0 interpro_id=IPR018257 interpro_description=Ribosomal protein L19, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD46_325_2

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comp(857..1615)
DNA (759bp) protein (253aa)
tRNA-(guanine-N1)-methyltransferase
tRNA (guanine-N(1)-)-methyltransferase n=5 Tax=Photobacterium RepID=TRMD_PHOPR (db=UNIREF evalue=8.0e-67 bit_score=256.0 identity=57.79 coverage=95.6521739130435)
seg (db=Seg db_id=seg from=115 to=129)
seg (db=Seg db_id=seg from=66 to=80)
ACD46_325_3

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comp(1615..2130)
DNA (516bp) protein (172aa)
rimM; 16S rRNA-processing protein RimM
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=8 to=171 evalue=2.0e-52 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022))
RimM (db=HMMPfam db_id=PF01782 from=11 to=93 evalue=2.7e-22 interpro_id=IPR002676 interpro_description=RimM protein GO=Biological Process: rRNA processing (GO:0006364))
Translation proteins (db=superfamily db_id=SSF50447 from=7 to=96 evalue=2.8e-22 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel)
ACD46_325_4

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comp(2151..2423)
DNA (273bp) protein (91aa)
30S ribosomal protein S16 n=1 Tax=Psychrobacter sp. PRwf-1 RepID=RS16_PSYWF (db=UNIREF evalue=7.0e-26 bit_score=119.0 identity=63.22 coverage=94.5054945054945)
rpsP; 30S ribosomal protein S16
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=2 to=11 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=2 to=81 evalue=3.9e-34 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD46_325_5
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2515..3486)
DNA (972bp) protein (324aa)
signal recognition particle protein Srp54
signal recognition particle protein Srp54
Signal recognition particle subunit FFH/SRP54 (Srp54) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U318_MARAV (db=UNIREF evalue=2.0e-102 bit_score=375.0 identity=68.95 coverage=81.1728395061728)
coiled-coil (db=Coil db_id=coil from=147 to=175 evalue=NA)
Displaying 5 items

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