ggKbase home page

ACD4_20

Alias: ACD4_36045.5190.12

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_20_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)
DNA protecting protein DprA; K04096 DNA processing protein (db=KEGG evalue=3.0e-18 bit_score=94.0 identity=28.47 coverage=78.0346820809249)
DNA_processg_A (db=HMMPfam db_id=PF02481 from=73 to=168 evalue=1.4e-15 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
DNA protecting protein DprA; K04096 DNA processing protein Tax=ACD4
Topoisomerase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDA7_FUSMR alias=ACD49_C00003G00031,ACD49_39878.259358.21G0031,ACD49_39878.259358.21_31 id=68795 tax=ACD49 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD4_20_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(611..1969)
DNA (1359bp) protein (453aa)
peptidase C69
seg (db=Seg db_id=seg from=102 to=117)
Putative modulator of DNA gyrase, PmbA/TldD (db=superfamily db_id=SSF111283 from=1 to=451 evalue=4.2e-65)
PmbA_TldD (db=HMMPfam db_id=PF01523 from=20 to=306 evalue=1.2e-30 interpro_id=IPR002510 interpro_description=Peptidase U62, modulator of DNA gyrase)
ACD4_20_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1970..2971)
DNA (1002bp) protein (334aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
seg (db=Seg db_id=seg from=12 to=24)
transmembrane_regions 73..95 Tax=ACD4
ACD4_20_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2949..3305)
DNA (357bp) protein (119aa)
RBFA (db=HMMPfam db_id=PF02033 from=10 to=101 evalue=3.6e-13 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
Ribosome-binding factor A, RbfA (db=superfamily db_id=SSF89919 from=3 to=99 evalue=8.2e-12 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=3 to=114 evalue=3.7e-08 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta)
RBFA_IDILO_Q5QTY9; (db=BlastProDom db_id=PD007327 from=32 to=89 evalue=1.0e-05 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
ACD4_20_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3387..4400)
DNA (1014bp) protein (338aa)
peptidase M24
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=119 to=337 evalue=7.5e-39 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=122 to=337 evalue=8.8e-39 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Peptidase_M24 (db=HMMPfam db_id=PF00557 from=130 to=324 evalue=3.6e-29 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
ACD4_20_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

4613..5227
DNA (615bp) protein (205aa)
coiled-coil (db=Coil db_id=coil from=77 to=98 evalue=NA)
seg (db=Seg db_id=seg from=120 to=134)
coiled-coil 77..98 Tax=ACD4
Displaying 6 items

View Taxonomy