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ACD4_27

Alias: ACD4_59356.14049.14

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_27_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3..308)
DNA (306bp) protein (102aa)
3..308 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_27_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(328..1017)
DNA (690bp) protein (230aa)
328..1017 - (rbs_motif=TAAT rbs_spacer=15bp)
hypothetical protein Tax=ACD4
ACD4_27_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

1525..2082
DNA (558bp) protein (186aa)
1525..2082 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD4
ACD4_27_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2260..2421)
DNA (162bp) protein (54aa)
seg (db=Seg db_id=seg from=31 to=48)
seg (db=Seg db_id=seg from=8 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions 5..22 Tax=ACD4
ACD4_27_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2435..6049)
DNA (3615bp) protein (1205aa)
seg (db=Seg db_id=seg from=1183 to=1203)
seg (db=Seg db_id=seg from=405 to=426)
seg (db=Seg db_id=seg from=40 to=53)
coiled-coil (db=Coil db_id=coil from=409 to=430 evalue=NA)
ACD4_27_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(6176..7075)
DNA (900bp) protein (300aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=292)
seg (db=Seg db_id=seg from=53 to=68)
transmembrane_regions 7..25 Tax=ACD4
ACD4_27_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

7281..7826
DNA (546bp) protein (182aa)
ribosome recycling factor
seg (db=Seg db_id=seg from=160 to=181)
coiled-coil (db=Coil db_id=coil from=128 to=156 evalue=NA)
RIBOSOME RECYCLING FACTOR (db=HMMPanther db_id=PTHR20982 from=1 to=181 evalue=1.3e-60 interpro_id=IPR002661 interpro_description=Ribosome recycling factor GO=Biological Process: translation (GO:0006412))
ACD4_27_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

7939..8460
DNA (522bp) protein (174aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8EGL4_SHEON (db=UNIREF evalue=5.0e-25 bit_score=116.0 identity=39.16 coverage=94.8275862068966)
seg (db=Seg db_id=seg from=81 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD4_27_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

8454..11459
DNA (3006bp) protein (1002aa)
transcription-repair coupling factor
transcription-repair coupling factor
Transcription-repair coupling factor n=9 Tax=Clostridium perfringens RepID=Q0TMG8_CLOP1 (db=UNIREF evalue=9.0e-131 bit_score=472.0 identity=40.64 coverage=58.5828343313373)
seg (db=Seg db_id=seg from=336 to=346)
ACD4_27_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

11471..11992
DNA (522bp) protein (174aa)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=9 to=123 evalue=3.2e-10)
HD-domain/PDEase-like Tax=ACD4
ACD4_27_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(11984..12343)
DNA (360bp) protein (120aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=112 evalue=2.7e-06)
S-adenosyl-L-methionine-dependent methyltransferases Tax=ACD4
ACD4_27_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(12673..13044)
DNA (372bp) protein (124aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=119 evalue=1.3e-11)
Rrf2 (db=HMMPfam db_id=PF02082 from=3 to=79 evalue=7.0e-10 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
HTH_RRF2_2 (db=ProfileScan db_id=PS51197 from=3 to=123 evalue=16.038 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
"Winged helix" DNA-binding domain Tax=ACD4
ACD4_27_13
ACD49, ACD49, ACD49, ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(13995..14087)
DNA (93bp) protein (31aa)
13995..14087 - (rbs_motif=None rbs_spacer=None)
Displaying 13 items

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