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ACD4_33

Alias: ACD4_85716.13370.12

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_33_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
cell division protein FtsK
seg (db=Seg db_id=seg from=71 to=82)
SPORULATION PROTEIN RELATED (db=HMMPanther db_id=PTHR22683 from=1 to=145 evalue=5.5e-36)
DNA TRANSLOCASE FTSK (db=HMMPanther db_id=PTHR22683:SF1 from=1 to=145 evalue=5.5e-36)
ACD4_33_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

1072..1728
DNA (657bp) protein (219aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
seg (db=Seg db_id=seg from=175 to=196)
seg (db=Seg db_id=seg from=144 to=168)
ACD4_33_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

2329..2922
DNA (594bp) protein (198aa)
2329..2922 + (rbs_motif=TTA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_33_4

Not on your lists

2991..3503
DNA (513bp) protein (171aa)
seg (db=Seg db_id=seg from=83 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
ACD4_33_5
unknown

Not on your lists

3509..3856
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXN1_9BACT (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=32.5 coverage=66.3793103448276)
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXN1_9BACT Tax=ACD4
ACD4_33_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3986..4429)
DNA (444bp) protein (148aa)
seg (db=Seg db_id=seg from=117 to=131)
seg 117..131 Tax=ACD4
ACD4_33_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4450..5073)
DNA (624bp) protein (208aa)
ctc; 50S ribosomal protein L25/general stress protein Ctc
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=2 to=190 evalue=2.4e-43 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=4 to=181 evalue=1.9e-32 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=16 to=90 evalue=2.5e-20 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
ACD4_33_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

5224..5823
DNA (600bp) protein (200aa)
coiled-coil (db=Coil db_id=coil from=38 to=69 evalue=NA)
Tax=ACD4
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 alias=ACD49_39878.259358.21G0076,ACD49_39878.259358.21_76,ACD49_C00003G00076 id=68748 tax=ACD49 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=BD1-5 organism_desc=BD1-5
nucleotidyltransferase domain-containing protein
ACD4_33_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5891..6643)
DNA (753bp) protein (251aa)
5891..6643 - (rbs_motif=TAAT rbs_spacer=9bp)
hypothetical protein Tax=ACD4
ACD4_33_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

6764..7219
DNA (456bp) protein (152aa)
6764..7219 + (rbs_motif=TAAT rbs_spacer=15bp)
hypothetical protein Tax=ACD4
ACD4_33_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

7404..7871
DNA (468bp) protein (156aa)
7404..7871 + (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_33_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(7868..8743)
DNA (876bp) protein (292aa)
putative cyclic beta-1,2-glucan modification protein
Sulfatase (db=HMMPfam db_id=PF00884 from=17 to=264 evalue=7.9e-17 interpro_id=IPR000917 interpro_description=Sulfatase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: sulfuric ester hydrolase activity (GO:0008484))
Alkaline phosphatase-like (db=superfamily db_id=SSF53649 from=12 to=195 evalue=3.3e-06 interpro_id=IPR017850 interpro_description=Alkaline-phosphatase-like, core domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
sulfatase Tax=ACD4
ACD4_33_13
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(9360..9839)
DNA (480bp) protein (160aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=132 to=151)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD4_33_14
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(9846..10397)
DNA (552bp) protein (184aa)
O-methyltransferase
O-methyltransferase family 3 n=1 Tax=Thermincola sp. JR RepID=D5X824_9FIRM (db=UNIREF evalue=2.0e-10 bit_score=68.9 identity=32.54 coverage=67.3913043478261)
seg (db=Seg db_id=seg from=107 to=118)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=5 to=148 evalue=7.9e-22)
ACD4_33_15
ACD4, Gracilibacteria, Bacteria

Not on your lists

10527..11111
DNA (585bp) protein (195aa)
seg (db=Seg db_id=seg from=179 to=194)
seg (db=Seg db_id=seg from=129 to=148)
seg 129..148 Tax=ACD4
ACD4_33_16
ACD4, Gracilibacteria, Bacteria

Not on your lists

11157..11429
DNA (273bp) protein (91aa)
cytochrome C4
Chorismate mutase II (db=superfamily db_id=SSF48600 from=1 to=81 evalue=1.4e-18 interpro_id=IPR020822 interpro_description=Chorismate mutase, type II GO=Biological Process: chorismate metabolic process (GO:0046417))
no description (db=HMMSmart db_id=SM00830 from=7 to=87 evalue=3.9e-17 interpro_id=IPR002701 interpro_description=Chorismate mutase GO=Biological Process: chorismate metabolic process (GO:0046417))
CM_2 (db=HMMPfam db_id=PF01817 from=7 to=84 evalue=6.8e-15 interpro_id=IPR020822 interpro_description=Chorismate mutase, type II GO=Biological Process: chorismate metabolic process (GO:0046417))
ACD4_33_17
ACD4, Gracilibacteria, Bacteria

Not on your lists

11559..12398
DNA (840bp) protein (280aa)
putative arogenate/prephenate dehydrogenase (EC:1.3.1.-)
seg (db=Seg db_id=seg from=8 to=21)
seg (db=Seg db_id=seg from=241 to=252)
coiled-coil (db=Coil db_id=coil from=220 to=241 evalue=NA)
ACD4_33_18
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(13076..13408)
DNA (333bp) protein (111aa)
13076..13408 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD4
Displaying 18 items

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